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Q2JRB8 (Q2JRB8_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CYA_2737
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaChroococcalesSynechococcus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processregulation of transcription, DNA-dependent

Inferred from electronic annotation. Source: InterPro

   Molecular functiontwo-component response regulator activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JRB8 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: F4ED081BBC8D0436

FASTA38042,848
        10         20         30         40         50         60 
MQGRLQEIDI RSILQLIELG QRTGELFVEA RPSIYWFVFF LNGRIIYASE TEGHIARLKD 

        70         80         90        100        110        120 
YLRRFKLEAA LDEVQIPPKA AVNAPEYNRL WSLLENHKLN PSQGKQILLG MVREVLFDLL 

       130        140        150        160        170        180 
SLHQGSFIFE AGSPLAPQLT TFPVTPLLAE MVTQVQEWKK LHPYIQDPNQ APTIVNPLPL 

       190        200        210        220        230        240 
QQTLPAPVFK ALSEWSDGKT SIRQMGRYLG RDTLVVAKAI YPYVRQGAIH LSDPVLIIEP 

       250        260        270        280        290        300 
QRTRPLKPSD KPAHILCIDD SMAIQKTVEF ILQNEGYQVT TIGNPLKALG QVFLLNPDMI 

       310        320        330        340        350        360 
LCDVAMPKLD GYELCAMLRK SSQFRETPMI MLTGKDGFTD RLKARMAGAN EFLSKPFSER 

       370        380 
ELLTVVESYV GPPPKRGGGE 

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000239 Genomic DNA. Translation: ABD00841.1.
RefSeqYP_476104.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JRB8.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JRB8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3898705.
GenomeReviewsGene locus CYA_2737 in contig CP000239_GR.
KEGGcya:CYA_2737.
PATRIC23813730. VBISynSp90045_2690.
TIGRCYA_2737.

Phylogenomic databases

eggNOGCOG0784.
HOGENOMHBG439030.
OMALILCDIA.
PhylomeDBQ2JRB8.
ProtClustDBCLSK515290.

Enzyme and pathway databases

BioCycSSP321327:CYA_2737-MONOMER.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR024186. Sig_transdc_resp-reg_PatA.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
KOK02657.
PfamPF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFPIRSF005897. RR_PatA. 1 hit.
SMARTSM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. CheY_like. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JRB8_SYNJA
AccessionPrimary (citable) accession number: Q2JRB8
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)