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Q2JQ49 (Q2JQ49_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254
Ordered Locus Names:CYB_0066
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Ontologies

Keywords
   Biological processProtein biosynthesis HAMAP MF_00254
   Cellular componentCytoplasm HAMAP MF_00254
   LigandATP-binding HAMAP MF_00254
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase HAMAP MF_00254 EMBL ABD01067.1
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

glycine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JQ49 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: DEC8F87F3E7C9DA9

FASTA32837,799
        10         20         30         40         50         60 
MSAHTFQDLI FRLQQFWGEQ GCLILQPYDL EKGAGTMSPH TFLRALGPDP WRVAYVEPCR 

        70         80         90        100        110        120 
RPTDGRYGQN PNRLQHYFQY QVLIKPSPDD IQDVYLDSLQ ALGVNPAEHD VRFVEDDWES 

       130        140        150        160        170        180 
PTLGAWGVGW EVWLDGMEVT QFTYFQQVGG QDCRPVSVEI TYGLERLAMY LQGVDSVFDL 

       190        200        210        220        230        240 
CWNEHPSLGR ITYGQIYFQN EVEQSYYNFE YSDPEMLLEL FRLYEAEAKR LIETTQQKLQ 

       250        260        270        280        290        300 
KQVLPDRLAV SLLLPAYDYV LKCSHTFNLL DARGVIAVAE RTLYIGRIRN LARQLAELYV 

       310        320 
SQADRPGSSY ALRQPEPALV YRGASPQS

« Hide

References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000240 Genomic DNA. Translation: ABD01067.1.
RefSeqYP_476330.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JQ49.
SMRQ2JQ49. Positions 5-303.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JQ49.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3900737.
GenomeReviewsGene locus CYB_0066 in contig CP000240_GR.
KEGGcyb:CYB_0066.
PATRIC23802398. VBISynSp29577_0066.
TIGRCYB_0066.

Phylogenomic databases

eggNOGCOG0752.
HOGENOMHBG285316.
OMACRRPTDG.
PhylomeDBQ2JQ49.
ProtClustDBPRK09348.

Enzyme and pathway databases

BioCycSSP321332:CYB_0066-MONOMER.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JQ49_SYNJB
AccessionPrimary (citable) accession number: Q2JQ49
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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