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Q2JNM6

- GLGA1_SYNJB

UniProt

Q2JNM6 - GLGA1_SYNJB

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Protein

Glycogen synthase 1

Gene
glgA1, CYB_0646
Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucose By similarity

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciSSP321332:GH1B-646-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1 (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene namesi
Name:glgA1
Ordered Locus Names:CYB_0646
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001938: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 491491Glycogen synthase 1UniRule annotationPRO_0000241802Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_0646.

Structurei

3D structure databases

ProteinModelPortaliQ2JNM6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiSVYCGWV.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JNM6-1 [UniParc]FASTAAdd to Basket

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MYIVQIASEC APVIKAGGLG DVVYGLSREL EVRGHCVELV LPKYDTMRYD    50
QIWGLHDAYR DLWVPWYGGA IHCSVYCGWV HGRLCFFIEP HSGDNFFNRG 100
CYYGCPDDNM RFAFFSKAAL EFLLQSNKRP DIIHCHDWQT GLVPVLLFEI 150
YKYHGMGNQR VCYTIHNFKH QGFGGPEILW ATGLNREPYY FHYDRLRDNF 200
NPFSLNFMKG GIVFSNFVTT VSPNHALEVQ FGDYGYGLGH TLYLHRHKFR 250
GVLNGIDYDI WNPEIDRFIP VRYTAQTLEN KAKNKKALRD RLLLQDVDKP 300
IVAYIGRLDE QKGVHLVHHA IYRSLFKNAQ FVLLGSATER GIGAWFAHEK 350
SYLNNNPDVH IELGFNEELS HLIYAGADII VVPSHYEPCG LTQMIGLKYG 400
TVPVVRGVGG LVDTVFDRDY DPHKLPEQRN GYVFYHTDPA ALESALDRAI 450
DLWYTAPDQF RQLQIQGMSY DYSWNYPGKE YLEIYDFIRH R 491
Length:491
Mass (Da):56,801
Last modified:March 7, 2006 - v1
Checksum:i1FD5318D85281584
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000240 Genomic DNA. Translation: ABD01633.1.
RefSeqiWP_011432291.1. NC_007776.1.
YP_476896.1. NC_007776.1.

Genome annotation databases

EnsemblBacteriaiABD01633; ABD01633; CYB_0646.
GeneIDi3902301.
KEGGicyb:CYB_0646.
PATRICi23803580. VBISynSp29577_0651.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000240 Genomic DNA. Translation: ABD01633.1 .
RefSeqi WP_011432291.1. NC_007776.1.
YP_476896.1. NC_007776.1.

3D structure databases

ProteinModelPortali Q2JNM6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 321332.CYB_0646.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD01633 ; ABD01633 ; CYB_0646 .
GeneIDi 3902301.
KEGGi cyb:CYB_0646.
PATRICi 23803580. VBISynSp29577_0651.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi SVYCGWV.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SSP321332:GH1B-646-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-2-3B'a(2-13).

Entry informationi

Entry nameiGLGA1_SYNJB
AccessioniPrimary (citable) accession number: Q2JNM6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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