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Q2JLS3 (Q2JLS3_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine dehydrogenase PIRNR PIRNR000183
EC=1.4.1.1 PIRNR PIRNR000183
Gene names
Name:ald EMBL ABD02331.1
Ordered Locus Names:CYB_1358
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH. PIRNR PIRNR000183

Pathway

Amino-acid degradation; L-alanine degradation via dehydrogenase pathway; NH(3) and pyruvate from L-alanine: step 1/1. PIRNR PIRNR000183

Sequence similarities

Belongs to the AlaDH/PNT family. PIRNR PIRNR000183

Ontologies

Keywords
   LigandNAD PIRNR PIRNR000183
   Molecular functionOxidoreductase PIRNR PIRNR000183 EMBL ABD02331.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionalanine dehydrogenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JLS3 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: F9043EE7E0ECC407

FASTA36238,688
        10         20         30         40         50         60 
MRIGVPKEIK EQEFRVGLTP AAVRVLTEQG HQVWVETQAG QGAGFTDEDY QKAGAKLAVT 

        70         80         90        100        110        120 
PEEIYRQELV VKVKEPLPAE YSLLHPDLIL FTYLHLAASR ELTQALLQSG ATCLAYETVE 

       130        140        150        160        170        180 
WADGSLPLLM PMSMIAGRLS VQFGAHYLTR QQGGRGVLLG GIPGVPPGRV VILGGGTVGT 

       190        200        210        220        230        240 
EAAKMAVGLG ARVQILDINL QRLNELELIF GSRVELLYST AQSVEECVRE ADLVVGAVLV 

       250        260        270        280        290        300 
PGRRAPVLVG EELVAQMRPR SLIVDVAVDQ GGCIATTRVT THAQPVYEAH GVLHYGVPNM 

       310        320        330        340        350        360 
PGAVPWTSTQ ALVNATLPYI LKLANLGLPA ALEQDSALAK GLNIRAGKIV HPAVRATFPD 


LG

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000240 Genomic DNA. Translation: ABD02331.1.
RefSeqYP_477594.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JLS3.
SMRQ2JLS3. Positions 1-362.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JLS3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3901225.
GenomeReviewsGene locus CYB_1358 in contig CP000240_GR.
KEGGcyb:CYB_1358.
PATRIC23805042. VBISynSp29577_1374.
TIGRCYB_1358.

Phylogenomic databases

eggNOGCOG0686.
HOGENOMHBG289735.
OMAVAHGHEV.
PhylomeDBQ2JLS3.
ProtClustDBCLSK892536.

Enzyme and pathway databases

BioCycSSP321332:CYB_1358-MONOMER.

Family and domain databases

InterProIPR008143. Ala_DH/PNT_CS2.
IPR008141. Ala_DH/Pyr_transHydgase.
IPR007886. AlaDH/PNT_N.
IPR007698. AlaDH/PNT_NAD(H)-bd.
[Graphical view]
KOK00259.
PANTHERPTHR10160:SF3. PTHR10160:SF3. 1 hit.
PfamPF01262. AlaDh_PNT_C. 1 hit.
PF05222. AlaDh_PNT_N. 1 hit.
[Graphical view]
PIRSFPIRSF000183. Alanine_dh. 1 hit.
SMARTSM01002. AlaDh_PNT_C. 1 hit.
SM01003. AlaDh_PNT_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00518. AlaDH. 1 hit.
PROSITEPS00837. ALADH_PNT_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JLS3_SYNJB
AccessionPrimary (citable) accession number: Q2JLS3
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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