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Q2JLQ6 (Q2JLQ6_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl hydrolase, family 31 EMBL ABD02348.1
Gene names
Ordered Locus Names:CYB_1375
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABD02348.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JLQ6 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 9239720EF92FAAC6

FASTA82092,704
        10         20         30         40         50         60 
MGNPLSPPGH RLALRAAICL QSMLEPGEIL GLDPAGANGQ SPARPPQRQT CGSLQQLQPH 

        70         80         90        100        110        120 
SRGIHLICAQ GRWSMQVLTP RLFRLRFSPS GAFLPRRSWD VAPADEEWPP APFELQESST 

       130        140        150        160        170        180 
QIHLSTSQVQ VQIGRDPLRF SFQDSQGQEF CADVSSGLTW GSDSIRLVKH LHPAEHIYGL 

       190        200        210        220        230        240 
GERAGLLNKR GRRYSHWTRD CWNYDAHSDN LYQAIPFALF LRPNLCYGLF LHCTHWSQFD 

       250        260        270        280        290        300 
LGQIDPEQWA IEVRAPELDY YLIYGPTPAL VLETYTQLTG RPPLPPLWAL GYQQCRWSYA 

       310        320        330        340        350        360 
SAAQVQTVAQ QFRQRQIPCD VIYLDIDYMR GYRVFTWDPR RFPEPARLMA QLHEAGFRVV 

       370        380        390        400        410        420 
AIVDPGVKFE PEADYAVFDE GLAQDFFIRR ADGHLFHGYV WPGKVLFPDF LRPGVRQWWG 

       430        440        450        460        470        480 
SWQRVLTQAG VDGIWNDMNE PALNDRPFGD GGQIVDIPLD APQGPPDEPT THAEVHNLYG 

       490        500        510        520        530        540 
LLMTRASREG LEQLNPNRRP FVLTRSGFAG IQRWAAVWTG DNQSSWEHLE MSLPMLLNLG 

       550        560        570        580        590        600 
LSGVSFVGAD IGGFGGNATP ELFARWMQMG ILYPLMRGHS ALGTRPHEPW SFGLEVETIC 

       610        620        630        640        650        660 
RQAIQLRYQL LPYLYSLFWE SSQTGSPILR PLLYEFPDDP QTYEISDQAM LGSALLAAPV 

       670        680        690        700        710        720 
VRPGVRCRAV YLPQGTWFDW WTGQAHTGPR YILVPAPLEQ LPLFVRGGSV LPLAPPCPST 

       730        740        750        760        770        780 
AHLRRDQPHL KLYPGNGSFT LYEDDGETLA HRAGAWATTL FRLRQQNGQL ILEIEARQGN 

       790        800        810        820 
WSPPQRSWLL EPLGHTPLSL PDTGQPQRVL WPTPEDPPFR

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000240 Genomic DNA. Translation: ABD02348.1.
RefSeqYP_477611.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JLQ6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JLQ6.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3901242.
GenomeReviewsGene locus CYB_1375 in contig CP000240_GR.
KEGGcyb:CYB_1375.
PATRIC23805080. VBISynSp29577_1393.
TIGRCYB_1375.

Phylogenomic databases

eggNOGCOG1501.
HOGENOMHBG441204.
OMAEPSVFNE.
PhylomeDBQ2JLQ6.
ProtClustDBCLSK896264.

Enzyme and pathway databases

BioCycSSP321332:CYB_1375-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 2 hits.
KOK01187.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00129. GLYCOSYL_HYDROL_F31_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JLQ6_SYNJB
AccessionPrimary (citable) accession number: Q2JLQ6
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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