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Q2JLM7 (Q2JLM7_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
GDSL-like lipase/acylhydrolase domain protein EMBL ABD02380.1
Gene names
Ordered Locus Names:CYB_1412
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length766 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABD02380.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JLM7 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 7CA17EA68C38979F

FASTA76686,270
        10         20         30         40         50         60 
MYRFQVRAIT QPGERIALVG SSAKLGSWDP CHCIWLQTDP AHYPLWWVEL PLSPADGTPG 

        70         80         90        100        110        120 
PLLPYSGCSK EIPRVEYRYL RVQAGGEVIW ESTAVNRWVP LEPEPLPAVL IVEDGEFGQI 

       130        140        150        160        170        180 
PAYPYGYFAD PIPEVEPENP QGLKVVILGS SVALGCSAWL LRGWAWLLQK ALQERYGHQV 

       190        200        210        220        230        240 
RNLSQLGANV SRTLLRFEQA VIPEHPDVVI VALSLGNEGL ASALPQHRRA LQRRFENGLQ 

       250        260        270        280        290        300 
RLIQRIQDIG ALPVLGGVYP HANYGPEQHL LLQETQQRML SWGCPVFNWL PHLEDGQSRW 

       310        320        330        340        350        360 
KPDLAFDPAH PNSKGHQVMF EAIDLSLLDP GQVSSARRKL AQPVGERVVF ADEHGFWVTA 

       370        380        390        400        410        420 
ETGKNQFRIV NITPYPYTIT PTWQPLQAAF QKAGLQPGLY IGKSDERLGD ATLYSLSVQE 

       430        440        450        460        470        480 
DGSVQTTLSI PADADLVFSP VAQFFSSESV ETIFEDGSLI LLKLSGSSEG SSDPMPRLCV 

       490        500        510        520        530        540 
INQSSHEYNI HPMWKEVRAA LKAMPAGVYE DPSHREALFR TLMIGEGGLE SRVKAAPGSV 

       550        560        570        580        590        600 
MLLEYTCKLS DIHRFAIVPL GDRCAVRMLL YKLEYDGPAF PFDLTRTSNL ADVADMIHNE 

       610        620        630        640        650        660 
FQGMWDPQYL HYSPEDRRIY HSKWTGLSFG HEVEEGEDPL QNMHPIHERM RTRYTARAKR 

       670        680        690        700        710        720 
FMYVLEKADK VLFVRTGGCR REAVVDLMDK LAAKRRGKPF LLLIVSPQSS DEFAGIPNVI 

       730        740        750        760 
HYEMELNPDR MCADPEHWKY CTGVMRDILH SLGVSTRNLF WCPPQL

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000240 Genomic DNA. Translation: ABD02380.1.
RefSeqYP_477643.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JLM7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JLM7.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3901316.
GenomeReviewsGene locus CYB_1412 in contig CP000240_GR.
KEGGcyb:CYB_1412.
PATRIC23805146. VBISynSp29577_1422.
TIGRCYB_1412.

Phylogenomic databases

HOGENOMHBG439420.
OMADRCAVRM.
PhylomeDBQ2JLM7.
ProtClustDBCLSK423166.

Enzyme and pathway databases

BioCycSSP321332:CYB_1412-MONOMER.

Family and domain databases

InterProIPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR014903. DUF1796_papain-like.
IPR013830. Esterase_SGNH_hydro-type.
IPR013831. Esterase_SGNH_hydro-type_subgr.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:3.40.50.1110. Esterase_SGNH_hydro-type_subgr. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PfamPF00686. CBM_20. 1 hit.
PF08795. DUF1796. 1 hit.
[Graphical view]
SMARTSM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. CBD_4. 1 hit.
SSF52266. Esterase_SGNH_hydro-type. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JLM7_SYNJB
AccessionPrimary (citable) accession number: Q2JLM7
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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