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Q2JKU0

- GLGA2_SYNJB

UniProt

Q2JKU0 - GLGA2_SYNJB

Protein

Glycogen synthase 2

Gene

glgA2

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei18 – 181ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciSSP321332:GH1B-1734-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthase 2UniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthase 2UniRule annotation
    Gene namesi
    Name:glgA2UniRule annotation
    Ordered Locus Names:CYB_1734
    OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
    Taxonomic identifieri321332 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001938: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 513513Glycogen synthase 2PRO_0000241803Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi321332.CYB_1734.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2JKU0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OMAiETWNESE.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2JKU0-1 [UniParc]FASTAAdd to Basket

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    MVQAKILFAA AEAAPLAKVG GMADVVGSLP VVLRKLGQDV RIIMPLYGFL    50
    WDKFGQEPGQ YPRSKDPIWS KQVMGQVADI YESVLPGTDV PLYLVSHYCF 100
    APHRIYYGED EFWRFTFFAN AVAEFAWTYY PWKPNIIHCH DWHTGMIPAW 150
    MHQAPDIGTV FTIHNLAYQG PWRWQLERMT WLPWYFSAHN TMAAGILYAD 200
    QVNTVSPTYA MEIRTPLHGE GLQDLLAWKG ERLRGILNGI DIDRFDPRTD 250
    PDLEANFSID DLSGRAANKA TLQAKLGLTV NPDTFLMGMV ARLVEQKGID 300
    LLIQALDRFL DYSDAQFVLL GGSGEAYYEG RIREMAERHP GKMAYQKGYQ 350
    PKLAQLIYGG ADAFLMPSRF EPCGISQMIA MRYGCVPIVR RTGGLVDTVS 400
    HHIPSKGIGT GYCFDRYEAL DFYTCLARAW EAFQHKETWQ ALQKRGMASD 450
    FSWHRSALEY LRMYELILNL PLLPEKPPEP PNSPSSSPPK LKKPISSQPR 500
    SKGIPELQQR PEE 513
    Length:513
    Mass (Da):58,218
    Last modified:March 7, 2006 - v1
    Checksum:iCEBAAB84167C71CC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000240 Genomic DNA. Translation: ABD02691.1.
    RefSeqiWP_011433335.1. NC_007776.1.
    YP_477954.1. NC_007776.1.

    Genome annotation databases

    EnsemblBacteriaiABD02691; ABD02691; CYB_1734.
    GeneIDi3901796.
    KEGGicyb:CYB_1734.
    PATRICi23805800. VBISynSp29577_1741.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000240 Genomic DNA. Translation: ABD02691.1 .
    RefSeqi WP_011433335.1. NC_007776.1.
    YP_477954.1. NC_007776.1.

    3D structure databases

    ProteinModelPortali Q2JKU0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 321332.CYB_1734.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD02691 ; ABD02691 ; CYB_1734 .
    GeneIDi 3901796.
    KEGGi cyb:CYB_1734.
    PATRICi 23805800. VBISynSp29577_1741.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OMAi ETWNESE.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci SSP321332:GH1B-1734-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
      Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
      ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JA-2-3B'a(2-13).

    Entry informationi

    Entry nameiGLGA2_SYNJB
    AccessioniPrimary (citable) accession number: Q2JKU0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3