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Q2JKU0

- GLGA2_SYNJB

UniProt

Q2JKU0 - GLGA2_SYNJB

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Protein

Glycogen synthase 2

Gene

glgA2

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei18 – 181ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciSSP321332:GH1B-1734-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 2UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 2UniRule annotation
Gene namesi
Name:glgA2UniRule annotation
Ordered Locus Names:CYB_1734
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001938: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 513513Glycogen synthase 2PRO_0000241803Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_1734.

Structurei

3D structure databases

ProteinModelPortaliQ2JKU0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiETWNESE.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JKU0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVQAKILFAA AEAAPLAKVG GMADVVGSLP VVLRKLGQDV RIIMPLYGFL
60 70 80 90 100
WDKFGQEPGQ YPRSKDPIWS KQVMGQVADI YESVLPGTDV PLYLVSHYCF
110 120 130 140 150
APHRIYYGED EFWRFTFFAN AVAEFAWTYY PWKPNIIHCH DWHTGMIPAW
160 170 180 190 200
MHQAPDIGTV FTIHNLAYQG PWRWQLERMT WLPWYFSAHN TMAAGILYAD
210 220 230 240 250
QVNTVSPTYA MEIRTPLHGE GLQDLLAWKG ERLRGILNGI DIDRFDPRTD
260 270 280 290 300
PDLEANFSID DLSGRAANKA TLQAKLGLTV NPDTFLMGMV ARLVEQKGID
310 320 330 340 350
LLIQALDRFL DYSDAQFVLL GGSGEAYYEG RIREMAERHP GKMAYQKGYQ
360 370 380 390 400
PKLAQLIYGG ADAFLMPSRF EPCGISQMIA MRYGCVPIVR RTGGLVDTVS
410 420 430 440 450
HHIPSKGIGT GYCFDRYEAL DFYTCLARAW EAFQHKETWQ ALQKRGMASD
460 470 480 490 500
FSWHRSALEY LRMYELILNL PLLPEKPPEP PNSPSSSPPK LKKPISSQPR
510
SKGIPELQQR PEE
Length:513
Mass (Da):58,218
Last modified:March 7, 2006 - v1
Checksum:iCEBAAB84167C71CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD02691.1.
RefSeqiWP_011433335.1. NC_007776.1.
YP_477954.1. NC_007776.1.

Genome annotation databases

EnsemblBacteriaiABD02691; ABD02691; CYB_1734.
GeneIDi3901796.
KEGGicyb:CYB_1734.
PATRICi23805800. VBISynSp29577_1741.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD02691.1 .
RefSeqi WP_011433335.1. NC_007776.1.
YP_477954.1. NC_007776.1.

3D structure databases

ProteinModelPortali Q2JKU0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 321332.CYB_1734.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD02691 ; ABD02691 ; CYB_1734 .
GeneIDi 3901796.
KEGGi cyb:CYB_1734.
PATRICi 23805800. VBISynSp29577_1741.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi ETWNESE.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SSP321332:GH1B-1734-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-2-3B'a(2-13).

Entry informationi

Entry nameiGLGA2_SYNJB
AccessioniPrimary (citable) accession number: Q2JKU0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: March 7, 2006
Last modified: October 1, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3