Q2JKA1 (Q2JKA1_SYNJB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Response regulator EMBL ABD02894.1

Gene names

Ordered Locus Names:

CYB_1939

Organism

Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]

Taxonomic identifier

321332 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JKA1 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: A3E0E8BB84C7B2CB	FASTA	380	42,629
	10 20 30 40 50 60 MQGKLQEIDI RSILQLIELG QRTGELFVEA SPSVYWFVFF LNGRIIYASE TEGNIARLRD 70 80 90 100 110 120 YLHRFKLEAA LEEIQIPHKA AVNAPEYNRL WSLLESHKLN PNQGKQILLG MVREVLFDLL 130 140 150 160 170 180 SLHHGSFIFE AGSPLAPQLT TFPVTPLLTE IVAQVQEWKK LHPYIQAPNQ APTIVNPLPL 190 200 210 220 230 240 QQNLPAPVFK ALSEWSDGKT SIRQMGRYLG RDTLTVAKAI YPYVRQGAIQ LSEPVLIAEP 250 260 270 280 290 300 KPSRPLKPSD KPSHILCIDD SMAIQKTVEF ILQNEGYQVT TIGNPLKALG QVFLLNPDMI 310 320 330 340 350 360 LCDVAMPKLD GYELCAMLRK SSQFRETPMI MLTGKDGFTD RIKARMAGAN EFLSKPFAEK 370 380 ELLTIVESYV GPPPKRGGGE

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000240 Genomic DNA. Translation: ABD02894.1.
RefSeq	YP_478157.1. NC_007776.1.
3D structure databases
ProteinModelPortal	Q2JKA1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JKA1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3900263.
GenomeReviews	Gene locus CYB_1939 in contig CP000240_GR.
KEGG	cyb:CYB_1939.
PATRIC	23806226. VBISynSp29577_1952.
TIGR	CYB_1939.
Phylogenomic databases
eggNOG	COG0784.
HOGENOM	HBG439030.
OMA	LILCDIA.
PhylomeDB	Q2JKA1.
ProtClustDB	CLSK515290.
Enzyme and pathway databases
BioCyc	SSP321332:CYB_1939-MONOMER.
Family and domain databases
InterPro	IPR011006. CheY-like_superfamily. IPR024186. Sig_transdc_resp-reg_PatA. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
KO	K02657.
Pfam	PF00072. Response_reg. 1 hit. [Graphical view]
PIRSF	PIRSF005897. RR_PatA. 1 hit.
SMART	SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF52172. CheY_like. 1 hit.
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2JKA1_SYNJB

Accession

Primary (citable) accession number: Q2JKA1

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)