Q2JJT4 (Q2JJT4_SYNJB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit EMBL ABD03073.1

Gene names

Ordered Locus Names:

CYB_2127

Organism

Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP] EMBL ABD03073.1

Taxonomic identifier

321332 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	571 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	electron transport chain Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-CH group of donors Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JJT4 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 17725C4BBBA98167	FASTA	571	63,142
	10 20 30 40 50 60 MLEHDIVIIG GGLAGCRAAL EVMRRDPSLD LALVSKTHPI RSHSVAAQGG IAAALQNVDP 70 80 90 100 110 120 QDSWEAHAFD TVKGSDYLAD QDAVEILARE APEVIIDLEH LGVLFSRLPD GRIAQRAFGG 130 140 150 160 170 180 HSHPRTCYAA DKTGQAILHE LVSNLKRFGV KLYSEWYVLD LILEDNQVQG VVMLEQASGR 190 200 210 220 230 240 LEVLRAKAVM LATGGYGRIY NSTSNDFAST GDGMAMVARA GLPLQDMEFV QFHPTGLYPV 250 260 270 280 290 300 GVLISEAVRG EGAYLINGKG ERFMAAYAPS QMELAPRDIT SRAIVTEVRA GRGIDGKDFV 310 320 330 340 350 360 YLDLRHLGAE KIHTRLPFCW EEAHRHLGID AVVDPIPVRP TVHYCMGGIP VTVEGQVLRD 370 380 390 400 410 420 AQTRVEGLFA AGETACVSVH GANRLGSNSL LECVVFGRRT GAAMVEAVRG RALPKVDEGS 430 440 450 460 470 480 LLKQAASRIA GLLERSGKSR IDQVRRQFQD CMTEHCGVYR TESVLQEGIQ KWQQIRQRYE 490 500 510 520 530 540 RDLHLDDRGK VWNTELIEAL ELDNLMTVGA LILASALERR ESRGSHARED YPQRDDQRFL 550 560 570 QHTLAAFREG SPQISYRPVV ITRFPPQERK Y

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000240 Genomic DNA. Translation: ABD03073.1.
RefSeq	YP_478336.1. NC_007776.1.
3D structure databases
ProteinModelPortal	Q2JJT4.
ModBase	Search...
Protein-protein interaction databases
STRING	321332.CYB_2127.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD03073; ABD03073; CYB_2127.
GeneID	3902848.
KEGG	cyb:CYB_2127.
PATRIC	23806610. VBISynSp29577_2138.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1053.
HOGENOM	HOG000160475.
KO	K00239.
OMA	SQMELAP.
ProtClustDB	PRK05945.
Family and domain databases
Gene3D	1.20.58.100. 1 hit.
InterPro	IPR003953. FAD_bind_dom. IPR003952. FRD_SDH_FAD_BS. IPR015939. Fum_Rdtase/Succ_DH_flav-like_C. IPR011281. Succ_DH_flav_su_fwd. IPR014006. Succ_Dhase_FrdA_Gneg. [Graphical view]
PANTHER	PTHR11632:SF5. PTHR11632:SF5. 1 hit.
Pfam	PF00890. FAD_binding_2. 1 hit. PF02910. Succ_DH_flav_C. 1 hit. [Graphical view]
SUPFAM	SSF46977. Succ_DH_flav_C. 1 hit.
TIGRFAMs	TIGR01816. sdhA_forward. 1 hit. TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITE	PS00504. FRD_SDH_FAD_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2JJT4_SYNJB

Accession

Primary (citable) accession number: Q2JJT4

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)