Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q2JJT4 (Q2JJT4_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:CYB_2127 EMBL ABD03073.1
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP] EMBL ABD03073.1
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length571 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2JJT4 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 17725C4BBBA98167

FASTA57163,142
        10         20         30         40         50         60 
MLEHDIVIIG GGLAGCRAAL EVMRRDPSLD LALVSKTHPI RSHSVAAQGG IAAALQNVDP 

        70         80         90        100        110        120 
QDSWEAHAFD TVKGSDYLAD QDAVEILARE APEVIIDLEH LGVLFSRLPD GRIAQRAFGG 

       130        140        150        160        170        180 
HSHPRTCYAA DKTGQAILHE LVSNLKRFGV KLYSEWYVLD LILEDNQVQG VVMLEQASGR 

       190        200        210        220        230        240 
LEVLRAKAVM LATGGYGRIY NSTSNDFAST GDGMAMVARA GLPLQDMEFV QFHPTGLYPV 

       250        260        270        280        290        300 
GVLISEAVRG EGAYLINGKG ERFMAAYAPS QMELAPRDIT SRAIVTEVRA GRGIDGKDFV 

       310        320        330        340        350        360 
YLDLRHLGAE KIHTRLPFCW EEAHRHLGID AVVDPIPVRP TVHYCMGGIP VTVEGQVLRD 

       370        380        390        400        410        420 
AQTRVEGLFA AGETACVSVH GANRLGSNSL LECVVFGRRT GAAMVEAVRG RALPKVDEGS 

       430        440        450        460        470        480 
LLKQAASRIA GLLERSGKSR IDQVRRQFQD CMTEHCGVYR TESVLQEGIQ KWQQIRQRYE 

       490        500        510        520        530        540 
RDLHLDDRGK VWNTELIEAL ELDNLMTVGA LILASALERR ESRGSHARED YPQRDDQRFL 

       550        560        570 
QHTLAAFREG SPQISYRPVV ITRFPPQERK Y 

« Hide

References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000240 Genomic DNA. Translation: ABD03073.1.
RefSeqYP_478336.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JJT4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING321332.CYB_2127.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD03073; ABD03073; CYB_2127.
GeneID3902848.
KEGGcyb:CYB_2127.
PATRIC23806610. VBISynSp29577_2138.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1053.
HOGENOMHOG000160475.
KOK00239.
OMAINVFGKR.
OrthoDBEOG6M3PC4.
ProtClustDBPRK05945.

Enzyme and pathway databases

BioCycSSP321332:GH1B-2127-MONOMER.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JJT4_SYNJB
AccessionPrimary (citable) accession number: Q2JJT4
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)