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Protein
Submitted name:

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene

CYB_2127

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321332:GH1B-2127-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase/fumarate reductase, flavoprotein subunitImported
Gene namesi
Ordered Locus Names:CYB_2127Imported
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)Imported
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001938: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_2127.

Structurei

3D structure databases

ProteinModelPortaliQ2JJT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1053.
HOGENOMiHOG000160475.
KOiK00239.
OMAiKWRTCFT.
OrthoDBiEOG6M3PC4.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JJT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEHDIVIIG GGLAGCRAAL EVMRRDPSLD LALVSKTHPI RSHSVAAQGG
60 70 80 90 100
IAAALQNVDP QDSWEAHAFD TVKGSDYLAD QDAVEILARE APEVIIDLEH
110 120 130 140 150
LGVLFSRLPD GRIAQRAFGG HSHPRTCYAA DKTGQAILHE LVSNLKRFGV
160 170 180 190 200
KLYSEWYVLD LILEDNQVQG VVMLEQASGR LEVLRAKAVM LATGGYGRIY
210 220 230 240 250
NSTSNDFAST GDGMAMVARA GLPLQDMEFV QFHPTGLYPV GVLISEAVRG
260 270 280 290 300
EGAYLINGKG ERFMAAYAPS QMELAPRDIT SRAIVTEVRA GRGIDGKDFV
310 320 330 340 350
YLDLRHLGAE KIHTRLPFCW EEAHRHLGID AVVDPIPVRP TVHYCMGGIP
360 370 380 390 400
VTVEGQVLRD AQTRVEGLFA AGETACVSVH GANRLGSNSL LECVVFGRRT
410 420 430 440 450
GAAMVEAVRG RALPKVDEGS LLKQAASRIA GLLERSGKSR IDQVRRQFQD
460 470 480 490 500
CMTEHCGVYR TESVLQEGIQ KWQQIRQRYE RDLHLDDRGK VWNTELIEAL
510 520 530 540 550
ELDNLMTVGA LILASALERR ESRGSHARED YPQRDDQRFL QHTLAAFREG
560 570
SPQISYRPVV ITRFPPQERK Y
Length:571
Mass (Da):63,142
Last modified:March 7, 2006 - v1
Checksum:i17725C4BBBA98167
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD03073.1.
RefSeqiWP_011433708.1. NC_007776.1.
YP_478336.1. NC_007776.1.

Genome annotation databases

EnsemblBacteriaiABD03073; ABD03073; CYB_2127.
GeneIDi3902848.
KEGGicyb:CYB_2127.
PATRICi23806610. VBISynSp29577_2138.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD03073.1.
RefSeqiWP_011433708.1. NC_007776.1.
YP_478336.1. NC_007776.1.

3D structure databases

ProteinModelPortaliQ2JJT4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321332.CYB_2127.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD03073; ABD03073; CYB_2127.
GeneIDi3902848.
KEGGicyb:CYB_2127.
PATRICi23806610. VBISynSp29577_2138.

Phylogenomic databases

eggNOGiCOG1053.
HOGENOMiHOG000160475.
KOiK00239.
OMAiKWRTCFT.
OrthoDBiEOG6M3PC4.

Enzyme and pathway databases

BioCyciSSP321332:GH1B-2127-MONOMER.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-2-3B'a(2-13)Imported.

Entry informationi

Entry nameiQ2JJT4_SYNJB
AccessioniPrimary (citable) accession number: Q2JJT4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.