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Q2JJT4

- Q2JJT4_SYNJB

UniProt

Q2JJT4 - Q2JJT4_SYNJB

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Protein
Submitted name:

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene

CYB_2127

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321332:GH1B-2127-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase/fumarate reductase, flavoprotein subunitImported
Gene namesi
Ordered Locus Names:CYB_2127Imported
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)Imported
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001938: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_2127.

Structurei

3D structure databases

ProteinModelPortaliQ2JJT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1053.
HOGENOMiHOG000160475.
KOiK00239.
OMAiMQRAMQS.
OrthoDBiEOG6M3PC4.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JJT4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLEHDIVIIG GGLAGCRAAL EVMRRDPSLD LALVSKTHPI RSHSVAAQGG
60 70 80 90 100
IAAALQNVDP QDSWEAHAFD TVKGSDYLAD QDAVEILARE APEVIIDLEH
110 120 130 140 150
LGVLFSRLPD GRIAQRAFGG HSHPRTCYAA DKTGQAILHE LVSNLKRFGV
160 170 180 190 200
KLYSEWYVLD LILEDNQVQG VVMLEQASGR LEVLRAKAVM LATGGYGRIY
210 220 230 240 250
NSTSNDFAST GDGMAMVARA GLPLQDMEFV QFHPTGLYPV GVLISEAVRG
260 270 280 290 300
EGAYLINGKG ERFMAAYAPS QMELAPRDIT SRAIVTEVRA GRGIDGKDFV
310 320 330 340 350
YLDLRHLGAE KIHTRLPFCW EEAHRHLGID AVVDPIPVRP TVHYCMGGIP
360 370 380 390 400
VTVEGQVLRD AQTRVEGLFA AGETACVSVH GANRLGSNSL LECVVFGRRT
410 420 430 440 450
GAAMVEAVRG RALPKVDEGS LLKQAASRIA GLLERSGKSR IDQVRRQFQD
460 470 480 490 500
CMTEHCGVYR TESVLQEGIQ KWQQIRQRYE RDLHLDDRGK VWNTELIEAL
510 520 530 540 550
ELDNLMTVGA LILASALERR ESRGSHARED YPQRDDQRFL QHTLAAFREG
560 570
SPQISYRPVV ITRFPPQERK Y
Length:571
Mass (Da):63,142
Last modified:March 7, 2006 - v1
Checksum:i17725C4BBBA98167
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000240 Genomic DNA. Translation: ABD03073.1.
RefSeqiWP_011433708.1. NC_007776.1.
YP_478336.1. NC_007776.1.

Genome annotation databases

EnsemblBacteriaiABD03073; ABD03073; CYB_2127.
GeneIDi3902848.
KEGGicyb:CYB_2127.
PATRICi23806610. VBISynSp29577_2138.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000240 Genomic DNA. Translation: ABD03073.1 .
RefSeqi WP_011433708.1. NC_007776.1.
YP_478336.1. NC_007776.1.

3D structure databases

ProteinModelPortali Q2JJT4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 321332.CYB_2127.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD03073 ; ABD03073 ; CYB_2127 .
GeneIDi 3902848.
KEGGi cyb:CYB_2127.
PATRICi 23806610. VBISynSp29577_2138.

Phylogenomic databases

eggNOGi COG1053.
HOGENOMi HOG000160475.
KOi K00239.
OMAi MQRAMQS.
OrthoDBi EOG6M3PC4.

Enzyme and pathway databases

BioCyci SSP321332:GH1B-2127-MONOMER.

Family and domain databases

Gene3Di 1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProi IPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-2-3B'a(2-13)Imported.

Entry informationi

Entry nameiQ2JJT4_SYNJB
AccessioniPrimary (citable) accession number: Q2JJT4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3