Q2JJF5 (Q2JJF5_SYNJB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Response regulator EMBL ABD03219.1

Gene names

Ordered Locus Names:

CYB_2277

Organism

Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]

Taxonomic identifier

321332 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JJF5 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: EBED4241B15FFD09	FASTA	364	40,481
	10 20 30 40 50 60 MSSLDLEGLD SVYHPSGSAL GPAEEAFWSS VPARTPRIWV VDDDPVVRCY IINVLKGSQY 70 80 90 100 110 120 YVESWESARA AWDPLQSLEE SEWPDMVICD WVMPEMSGVE FCCRLKGSAA GQFVYFILLT 130 140 150 160 170 180 SRSEVEARVE GLDAGADEFI TKPVDPEELR ARVRAGLRLQ RLTQALAQAN RQLRARNELL 190 200 210 220 230 240 ESLSLTDPLT GALNRRALDQ ALPHLLKQVG PRGEARYRYL CLLMMDVDHF KQVNDSYGHY 250 260 270 280 290 300 IGDCVLQAIV GRLQNQLRPS SLLYRYGGEE FVCVTPGLSP PRCGRYAESL RQAIAKRPID 310 320 330 340 350 360 ISPKRSLPVT ISIGGIVLSE DYCPEPETAL QQADSALYQA KQAGRNRVHI LIPTPGVYLP SSSG

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000240 Genomic DNA. Translation: ABD03219.1.
RefSeq	YP_478482.1. NC_007776.1.
3D structure databases
ProteinModelPortal	Q2JJF5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JJF5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3900559.
GenomeReviews	Gene locus CYB_2277 in contig CP000240_GR.
KEGG	cyb:CYB_2277.
PATRIC	23806902. VBISynSp29577_2280.
TIGR	CYB_2277.
Phylogenomic databases
eggNOG	COG3706.
HOGENOM	HBG753256.
OMA	VESWESA.
PhylomeDB	Q2JJF5.
ProtClustDB	CLSK750717.
Enzyme and pathway databases
BioCyc	SSP321332:CYB_2277-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR011006. CheY-like_superfamily. IPR000160. Diguanylate_cyclase-pred. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF52172. CheY_like. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2JJF5_SYNJB

Accession

Primary (citable) accession number: Q2JJF5

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)