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Q2JIU7

- Q2JIU7_SYNJB

UniProt

Q2JIU7 - Q2JIU7_SYNJB

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Protein
Superoxide dismutase
Gene
sodB, CYB_2514
Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciSSP321332:GH1B-2514-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodBImported
    Ordered Locus Names:CYB_2514Imported
    OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)Imported
    Taxonomic identifieri321332 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001938: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi321332.CYB_2514.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2JIU7.
    SMRiQ2JIU7. Positions 2-198.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiKIGIFNN.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2JIU7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFELPALPY PADALKPYMS AETFSFHHGK HHAAYVANLN KLIEGTDLAN    50
    KSLEEIIKAT FGDPDKVGIF NNAAQVWNHT FFWESMKPGG GGAPTGPIAD 100
    KINADFGSYD KFVEAFKTAA ATQFGSGWAW LVLEDGTLKV TKTPNAENPL 150
    VHGQTPLLTL DVWEHAYYLD YQNRRPDFIN AYLEHLVNWD AANARLAAA 199
    Length:199
    Mass (Da):21,984
    Last modified:March 7, 2006 - v1
    Checksum:i19654F626758660D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000240 Genomic DNA. Translation: ABD03447.1.
    RefSeqiWP_011434074.1. NC_007776.1.
    YP_478710.1. NC_007776.1.

    Genome annotation databases

    EnsemblBacteriaiABD03447; ABD03447; CYB_2514.
    GeneIDi3902739.
    KEGGicyb:CYB_2514.
    PATRICi23807378. VBISynSp29577_2514.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000240 Genomic DNA. Translation: ABD03447.1 .
    RefSeqi WP_011434074.1. NC_007776.1.
    YP_478710.1. NC_007776.1.

    3D structure databases

    ProteinModelPortali Q2JIU7.
    SMRi Q2JIU7. Positions 2-198.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 321332.CYB_2514.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD03447 ; ABD03447 ; CYB_2514 .
    GeneIDi 3902739.
    KEGGi cyb:CYB_2514.
    PATRICi 23807378. VBISynSp29577_2514.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi KIGIFNN.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci SSP321332:GH1B-2514-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
      Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
      ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JA-2-3B'a(2-13).

    Entry informationi

    Entry nameiQ2JIU7_SYNJB
    AccessioniPrimary (citable) accession number: Q2JIU7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 7, 2006
    Last sequence update: March 7, 2006
    Last modified: September 3, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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