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Protein
Submitted name:

Ribulose bisphosphate carboxylase, small subunit

Gene

cbbS

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSSP321332:GH1B-2577-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbSImported
Ordered Locus Names:CYB_2577Imported
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)Imported
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001938 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_2577.

Structurei

3D structure databases

ProteinModelPortaliQ2JIP5.
SMRiQ2JIP5. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiYIPAVEF.
OrthoDBiEOG6G20PM.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSiPR00152. RUBISCOSMALL.
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JIP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTLPKERRY ETLSYLPPLT DLQIIKQVQY ILDQGYIPAI EFNESSEPTV
60 70 80 90 100
RYWTLWKLPL FSATSPQEVL SEVQACRSAY PNCFIRVVGF DNIKQCQVLS
110
FLVYKPSGLR
Length:110
Mass (Da):12,808
Last modified:March 6, 2006 - v1
Checksum:i29BC902492422CB3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD03509.1.
RefSeqiWP_011434136.1. NC_007776.1.
YP_478772.1. NC_007776.1.

Genome annotation databases

EnsemblBacteriaiABD03509; ABD03509; CYB_2577.
KEGGicyb:CYB_2577.
PATRICi23807510. VBISynSp29577_2580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA. Translation: ABD03509.1.
RefSeqiWP_011434136.1. NC_007776.1.
YP_478772.1. NC_007776.1.

3D structure databases

ProteinModelPortaliQ2JIP5.
SMRiQ2JIP5. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321332.CYB_2577.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD03509; ABD03509; CYB_2577.
KEGGicyb:CYB_2577.
PATRICi23807510. VBISynSp29577_2580.

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiYIPAVEF.
OrthoDBiEOG6G20PM.

Enzyme and pathway databases

BioCyciSSP321332:GH1B-2577-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSiPR00152. RUBISCOSMALL.
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-2-3B'a(2-13)Imported.

Entry informationi

Entry nameiQ2JIP5_SYNJB
AccessioniPrimary (citable) accession number: Q2JIP5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2006
Last sequence update: March 6, 2006
Last modified: March 31, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.