Q2JIL0 (RL15_SYNJB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	CYB_2614

Organism

Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP]

Taxonomic identifier

321332 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	150 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 150	150	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_0000251575

Sequences

	Sequence		Length	Mass (Da)
	Q2JIL0 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: D9EDA41F7F497033	FASTA	150	16,136
	10 20 30 40 50 60 MRLEDIRPQA GSTRRRRRLG RGVSAGQGAS CGKGMRGQKA RKGGSTRPGF EGGQTPLYRR 70 80 90 100 110 120 LPKLKHFPRY RRRLEYTLVN LRALADLPAG SEVSLESLME RGIVTTNDGP LKILGDGEVS 130 140 150 VPLTIRAAAI TASAKVKVEA AGGRVEILGS

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000240 Genomic DNA. Translation: ABD03544.1.
RefSeq	YP_478807.1. NC_007776.1.
3D structure databases
ProteinModelPortal	Q2JIL0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JIL0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3901353.
GenomeReviews	Gene locus CYB_2614 in contig CP000240_GR.
KEGG	cyb:CYB_2614.
PATRIC	23807584. VBISynSp29577_2616.
TIGR	CYB_2614.
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HBG727142.
OMA	RKGRGHA.
PhylomeDB	Q2JIL0.
ProtClustDB	PRK05592.
Enzyme and pathway databases
BioCyc	SSP321332:CYB_2614-MONOMER.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_SYNJB

Accession

Primary (citable) accession number: Q2JIL0

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 3, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program