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Q2JHM0 (Q2JHM0_SYNJB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL ABD01662.1
Gene names
Ordered Locus Names:CYB_0677 EMBL ABD01662.1
OrganismSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) [Complete proteome] [HAMAP] EMBL ABD01662.1
Taxonomic identifier321332 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length1145 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2JHM0 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 67D44492097D4C71

FASTA1,145131,612
        10         20         30         40         50         60 
MIRAPLRSLI SPLTHDPLWY KDAIIYELPA RAFFDSDGDG VGDFQGLTEK LDYLQELGIT 

        70         80         90        100        110        120 
AVWLLPFFPS PLKDDGYDVS DFTSVHPDLG TLEDFKIFLE AAHKRGIRVI IELILNHTSD 

       130        140        150        160        170        180 
QHPWFQRARR AAPGTPERDF YVWSDTPEKY KEARIIFQDF EASNWTWDSA AKAYYWHRFY 

       190        200        210        220        230        240 
SHQPDLNYDN PAVQKAMFEV VDFWLSLGVD GMRLDAVPYL YEREGTTCES LPETHAFLKA 

       250        260        270        280        290        300 
LRRHIDQRYP GRMLLAEANQ WPEDAVAYFG DGDECHMEFH FPLMPRLFMA IQMEDRFPII 

       310        320        330        340        350        360 
DILQQTPPIP ETCQWALFLR NHDELTLEMV TDEERDYMYQ VYAKDPNARV NLGIRRRLAP 

       370        380        390        400        410        420 
LLGNSRRRIE LMNSLLFSLP GTPVIYYGDE IGMGDNIYLG DRNSVRTPMQ WSADRNAGFS 

       430        440        450        460        470        480 
RANPQKLYLP IVIDAEYHYE AVNVEAQRNN PHSLWWTMKR LIAVRKRFQA FGRGSFELLH 

       490        500        510        520        530        540 
PENRKVLAFM RAFGDERILV VANLSRYAQW VGLDLSPWEG LIPVEIFGHT EFPPIGRLPY 

       550        560        570        580        590        600 
FLTLGPHSFY WFSLEPKTET IHLSPSKAEE QERLVPLVVQ SGSPLVVQSG SWDSLLQGES 

       610        620        630        640        650        660 
QKQLEAVLAD YLYRCRWFGS QNRQLQAIHI LQAIPCRREE ESLLGSQILL LQAEFIEGDT 

       670        680        690        700        710        720 
QLYSLPVGYA TQEAAVHLRL EMPQAVILPV QVAGGPAGVI FNALADKSFL LRLLQLIAQQ 

       730        740        750        760        770        780 
GRLRHRQGEL WATSFAALEH DLEPRLLKAE QSYASVVYGN HYLLKLYHRV AEGVNPELEI 

       790        800        810        820        830        840 
GRYLLEHHPQ VRVPRLLGSL EYRRRRGARG FDPADQPITL AILQEYIPNE GDAWHYTLDS 

       850        860        870        880        890        900 
LGQFFEAVLV HYQEVDPVPV PQGSFLELSQ QPLPELAYAT IGSYLESVRI LAKRTAELHI 

       910        920        930        940        950        960 
ALAADTENKD FAPEPFSSLY QRSVYQSMRN LVGQVFPLLF ASAGRSPYKQ LPKLPEAEAN 

       970        980        990       1000       1010       1020 
LARAVCDQEG EIMSRFRLIL ERKITALRTR CHGDYHLGQV LFTGKDFVII DFEGEPARSL 

      1030       1040       1050       1060       1070       1080 
GERRLKRCPL RDVAGMLRSF HYAVHTALRQ QLESGLVCAD HCPDMMRWAQ FWHRWVCAGF 

      1090       1100       1110       1120       1130       1140 
LAEYLQVASQ AAFLPRSLQE IEVLLDAYLL EKAIYELGYE LNHRPEWVEI PLRGILQLLG 


ISTKV 

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-2-3B'a(2-13).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000240 Genomic DNA. Translation: ABD01662.1.
RefSeqYP_476925.1. NC_007776.1.

3D structure databases

ProteinModelPortalQ2JHM0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING321332.CYB_0677.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD01662; ABD01662; CYB_0677.
GeneID3902420.
KEGGcyb:CYB_0677.
PATRIC23803644. VBISynSp29577_0682.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAMAIEMED.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2503979.

Enzyme and pathway databases

BioCycSSP321332:GH1B-677-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2JHM0_SYNJB
AccessionPrimary (citable) accession number: Q2JHM0
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 16, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)