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Protein

Recombination protein RecR

Gene

recR

Organism
Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri56 – 71C4-typeUniRule annotationAdd BLAST16

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA recombination, DNA repair
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciSSP321332:G1G5P-2769-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Recombination protein RecRUniRule annotation
Gene namesi
Name:recRUniRule annotation
Ordered Locus Names:CYB_2895
OrganismiSynechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime)
Taxonomic identifieri321332 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeSynechococcus
Proteomesi
  • UP000001938 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003229601 – 199Recombination protein RecRAdd BLAST199

Proteomic databases

PRIDEiQ2JH53

Interactioni

Protein-protein interaction databases

STRINGi321332.CYB_2895

Structurei

3D structure databases

ProteinModelPortaliQ2JH53
SMRiQ2JH53
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini79 – 174ToprimUniRule annotationAdd BLAST96

Sequence similaritiesi

Belongs to the RecR family.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri56 – 71C4-typeUniRule annotationAdd BLAST16

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG4105F3K Bacteria
COG0353 LUCA
HOGENOMiHOG000103272
KOiK06187
OMAiDVMAIEN
OrthoDBiPOG091H01SF

Family and domain databases

CDDicd01025 TOPRIM_recR, 1 hit
HAMAPiMF_00017 RecR, 1 hit
InterProiView protein in InterPro
IPR000093 DNA_Rcmb_RecR
IPR003583 Hlx-hairpin-Hlx_DNA-bd_motif
IPR023627 Rcmb_RecR
IPR023628 Rcmb_RecR_C4-type_Zn
IPR015967 Rcmb_RecR_CS
IPR006171 TOPRIM_domain
IPR034137 TOPRIM_RecR
PANTHERiPTHR30446 PTHR30446, 1 hit
PfamiView protein in Pfam
PF02132 RecR, 1 hit
PF13662 Toprim_4, 1 hit
SMARTiView protein in SMART
SM00278 HhH1, 1 hit
SM00493 TOPRIM, 1 hit
SUPFAMiSSF111304 SSF111304, 1 hit
TIGRFAMsiTIGR00615 recR, 1 hit
PROSITEiView protein in PROSITE
PS01300 RECR, 1 hit
PS50880 TOPRIM, 1 hit

Sequencei

Sequence statusi: Complete.

Q2JH53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYTRPLARLI EELQRLPGIG SKTAQRLALH LINRPAGEIE ALAKALLEAK
60 70 80 90 100
QTVRHCSICF NWSAEDPCEI CRSPQRDPSL WCVVADVKDL IAMERTREFK
110 120 130 140 150
GLYHVLGGLI SPMNGIGVDQ LHIRELVARV AREKPQELIF AISPSVEGEV
160 170 180 190
TMHVVKDYLK PVAPTLRMTR LAFGLPMGSE LEYADEVTLA RALEARQEL
Length:199
Mass (Da):22,294
Last modified:March 7, 2006 - v1
Checksum:i6B63382E7166FB66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000240 Genomic DNA Translation: ABD03814.1
RefSeqiWP_011434433.1, NC_007776.1

Genome annotation databases

EnsemblBacteriaiABD03814; ABD03814; CYB_2895
KEGGicyb:CYB_2895

Similar proteinsi

Entry informationi

Entry nameiRECR_SYNJB
AccessioniPrimary (citable) accession number: Q2JH53
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: March 7, 2006
Last modified: May 23, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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