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Protein

Glutamate decarboxylase

Gene

Francci3_0181

Organism
Frankia sp. (strain CcI3)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciFSP106370:GI1F-186-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Francci3_0181Imported
OrganismiFrankia sp. (strain CcI3)Imported
Taxonomic identifieri106370 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000001937 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi106370.Francci3_0181.

Structurei

3D structure databases

ProteinModelPortaliQ2JGL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JGL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALHRQASGD RAEETVDVRP HLAPLGEEVV VPRFRMPQES TAPETAYQIV
60 70 80 90 100
HDELMLDGKA RLNMATFVTT WMDSYADRLM AECAPKNMID KDEYPQTAAL
110 120 130 140 150
EERCVNILAD LWHAPDAEHA VGCSTTGSSE ACMLAGLAMI RRWRARRRSA
160 170 180 190 200
GAPADRPNIV MGVNVQVCWE KFARYWDVEA RLVPMAPGRT HLTADEAVAH
210 220 230 240 250
CDENTIGVVA ILGSTFDGSY EPVAGIVAAL DHLAASGGPD VPVHVDAASG
260 270 280 290 300
GFIAPFCDPD LVWDFQLDRV VSINTSGHKY GLVYPGVGWV LWRDRAHLPA
310 320 330 340 350
ELVFQVDYLG GTMPTFALNF SRPGAQVVAQ YYTLLQLGYK GYRRVAQACR
360 370 380 390 400
DNARWLAAEV AAMGPFELVS DGSGIPAFAF KLRDDITDYT VFDVSELLRT
410 420 430 440 450
RGWLVPAYRF PPGLTDLAVL RVVVRHEFSR DLAGLLIADL RRVVNRLAHP
460
GRRTAGDRPG ESSFHH
Length:466
Mass (Da):51,365
Last modified:March 7, 2006 - v1
Checksum:i14E2A44383775331
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD09573.1.
RefSeqiYP_479302.1. NC_007777.1.

Genome annotation databases

EnsemblBacteriaiABD09573; ABD09573; Francci3_0181.
KEGGifra:Francci3_0181.
PATRICi21923140. VBIFraSp10456_0203.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD09573.1.
RefSeqiYP_479302.1. NC_007777.1.

3D structure databases

ProteinModelPortaliQ2JGL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi106370.Francci3_0181.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD09573; ABD09573; Francci3_0181.
KEGGifra:Francci3_0181.
PATRICi21923140. VBIFraSp10456_0203.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciFSP106370:GI1F-186-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CcI3Imported.

Entry informationi

Entry nameiQ2JGL9_FRASC
AccessioniPrimary (citable) accession number: Q2JGL9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 1, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.