Q2JGL9 (Q2JGL9_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ABD09573.1
EC=4.1.1.15 EMBL ABD09573.1

Gene names

Ordered Locus Names:

Francci3_0181

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD09573.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ABD09573.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JGL9 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 14E2A44383775331	FASTA	466	51,365
	10 20 30 40 50 60 MALHRQASGD RAEETVDVRP HLAPLGEEVV VPRFRMPQES TAPETAYQIV HDELMLDGKA 70 80 90 100 110 120 RLNMATFVTT WMDSYADRLM AECAPKNMID KDEYPQTAAL EERCVNILAD LWHAPDAEHA 130 140 150 160 170 180 VGCSTTGSSE ACMLAGLAMI RRWRARRRSA GAPADRPNIV MGVNVQVCWE KFARYWDVEA 190 200 210 220 230 240 RLVPMAPGRT HLTADEAVAH CDENTIGVVA ILGSTFDGSY EPVAGIVAAL DHLAASGGPD 250 260 270 280 290 300 VPVHVDAASG GFIAPFCDPD LVWDFQLDRV VSINTSGHKY GLVYPGVGWV LWRDRAHLPA 310 320 330 340 350 360 ELVFQVDYLG GTMPTFALNF SRPGAQVVAQ YYTLLQLGYK GYRRVAQACR DNARWLAAEV 370 380 390 400 410 420 AAMGPFELVS DGSGIPAFAF KLRDDITDYT VFDVSELLRT RGWLVPAYRF PPGLTDLAVL 430 440 450 460 RVVVRHEFSR DLAGLLIADL RRVVNRLAHP GRRTAGDRPG ESSFHH

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CcI3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD09573.1.
RefSeq	YP_479302.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2JGL9.
ModBase	Search...
Protein-protein interaction databases
STRING	106370.Francci3_0181.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD09573; ABD09573; Francci3_0181.
GeneID	3903150.
KEGG	fra:Francci3_0181.
PATRIC	21923140. VBIFraSp10456_0203.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK947658.
Enzyme and pathway databases
BioCyc	FSP106370:GI1F-251-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2JGL9_FRASC

Accession

Primary (citable) accession number: Q2JGL9

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)