Q2JER8 (Q2JER8_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Allantoicase EMBL ABD10224.1
EC=3.5.3.4 EMBL ABD10224.1

Gene names

Ordered Locus Names:

Francci3_0840

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD10224.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	516 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABD10224.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	allantoicase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JER8 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 3AAA3B2ED6EF92A3	FASTA	516	56,141
	10 20 30 40 50 60 MSDAPDLTNL VDLAAARFGG TVVAVNDEFF AFAERMLLPE PPIVRPGVFT ERGQWTDGWE 70 80 90 100 110 120 TRRRRDLPGS DWAIIRLGSP GIAHAVTVDT THFTGNAPGA VEVHGATLPG YPSAAEVAEE 130 140 150 160 170 180 SVAWVPLVPR TPIVPDAANV LPVADQGRTR ITHLRLTIHP DGGVARLRVH GTVVPDPRMF 190 200 210 220 230 240 DRVTSDLAAA YLGGVVVAAS DMHYGDRHNL NASGEARAMG EGWETRRRRG DGHDWAVVRL 250 260 270 280 290 300 ATQGTIVRAE VDTRHFRGNA PRAVALWAAD NPDLLDPDDV TAITEWYPML PRTRVQPNTR 310 320 330 340 350 360 HLFDLEVPIQ ATHVRVDAIP DGGLARLRLT GAPTPVGREA LAMRWFDALS PDAAREELLA 370 380 390 400 410 420 CCESEDWAAA VAARRPFGTL AALLPAAEQE WWNLPASAWL EAFTAHPRIG ERPAHTPAPP 430 440 450 460 470 480 TTARATVVSL DAPRREQAAM DQATAEVRAA FEQGNAAYEE RFGYIFLVRA AGRDAEEMLA 490 500 510 LLRARLDNDP ADELRIAAGQ QAEITALRIR RLITGA

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD10224.1.
RefSeq	YP_479953.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2JER8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JER8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3905117.
GenomeReviews	Gene locus Francci3_0840 in contig CP000249_GR.
KEGG	fra:Francci3_0840.
PATRIC	21924594. VBIFraSp10456_0923.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4266.
HOGENOM	HBG480577.
OMA	ELKSDDW.
PhylomeDB	Q2JER8.
ProtClustDB	PRK13797.
Family and domain databases
HAMAP	MF_00813. Allantoicase. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. IPR018020. OHCU_decarboxylase. IPR017595. OHCU_decarboxylase-2. [Graphical view]
Gene3D	G3DSA:1.10.3330.10. G3DSA:1.10.3330.10. 1 hit.
KO	K01477.
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. PF09349. OHCU_decarbox. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 2 hits.
TIGRFAMs	TIGR02961. Allantoicase. 1 hit. TIGR03180. UraD_2. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2JER8_FRASC

Accession

Primary (citable) accession number: Q2JER8

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)