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Protein
Submitted name:

Transposase, IS4 family

Gene

Francci3_0672

Organism
Frankia sp. (strain CcI3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. transposase activity Source: InterPro

GO - Biological processi

  1. transposition, DNA-mediated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciFSP106370:GI1F-1211-MONOMER.
FSP106370:GI1F-1808-MONOMER.
FSP106370:GI1F-1994-MONOMER.
FSP106370:GI1F-2085-MONOMER.
FSP106370:GI1F-2363-MONOMER.
FSP106370:GI1F-2514-MONOMER.
FSP106370:GI1F-2738-MONOMER.
FSP106370:GI1F-2833-MONOMER.
FSP106370:GI1F-2975-MONOMER.
FSP106370:GI1F-3355-MONOMER.
FSP106370:GI1F-4172-MONOMER.
FSP106370:GI1F-4276-MONOMER.
FSP106370:GI1F-4278-MONOMER.
FSP106370:GI1F-689-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transposase, IS4 familyImported
Gene namesi
Ordered Locus Names:Francci3_0672Imported, Francci3_1189Imported, Francci3_1776Imported, Francci3_1962Imported, Francci3_2052Imported, Francci3_2330Imported, Francci3_2481Imported, Francci3_2704Imported, Francci3_2799Imported, Francci3_2941Imported, Francci3_3313Imported, Francci3_4115Imported, Francci3_4218Imported, Francci3_4220Imported
OrganismiFrankia sp. (strain CcI3)Imported
Taxonomic identifieri106370 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000001937 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi106370.Francci3_4220.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5433.
HOGENOMiHOG000041677.
OMAiWETEATW.
OrthoDBiEOG664CH2.

Family and domain databases

InterProiIPR002559. Transposase_11.
[Graphical view]
PfamiPF01609. DDE_Tnp_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JDS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVQSRMPVT PTDLGQAGSG QLVRMRRSLR VLGAHGGEVQ GLADVLAGVP
60 70 80 90 100
DPRDPRGIRH RLPVILGLSA AAVAAGEKSV EEIAAWAAHA PTQVLTALGA
110 120 130 140 150
RVHPVTGQPQ APSVDTMIRV LSAVDSSALA RAVGMFAAAR ARQARGGGRR
160 170 180 190 200
VVAVDGKTLR GAAGPEGRAP HLLAVAEHGT GVVLAEHEVG AKTNEVTAFA
210 220 230 240 250
PLLRELHSHD PLDGVVVTAD ALHTTRAHAD LIVTELGAHF VFTVKANTPA
260 270 280 290 300
LSVDCHQATD WTKIPIGHSA EGRAHGRFER RTIQLAQASE AIRARYPHAR
310 320 330 340 350
TVARIRRHVR RTVTTGTGRA RVTRTIPSTV TVHVLTSLTL DAVTPADLAG
360 370 380 390 400
YARGHWTIEN KVHWVRDVTF REDASRVRTG PLPRIMTTLR NLIIGLIRLA
410 420 430
GHNRIAPTIR RIRHDNALLL AILTLDNPAD LHQ
Length:433
Mass (Da):46,349
Last modified:March 7, 2006 - v1
Checksum:i9FC9ACD91ABE523A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD10056.1.
CP000249 Genomic DNA. Translation: ABD10568.1.
CP000249 Genomic DNA. Translation: ABD11152.1.
CP000249 Genomic DNA. Translation: ABD11337.1.
CP000249 Genomic DNA. Translation: ABD11426.1.
CP000249 Genomic DNA. Translation: ABD11698.1.
CP000249 Genomic DNA. Translation: ABD11848.1.
CP000249 Genomic DNA. Translation: ABD12065.1.
CP000249 Genomic DNA. Translation: ABD12157.1.
CP000249 Genomic DNA. Translation: ABD12299.1.
CP000249 Genomic DNA. Translation: ABD12670.1.
CP000249 Genomic DNA. Translation: ABD13463.1.
CP000249 Genomic DNA. Translation: ABD13565.1.
CP000249 Genomic DNA. Translation: ABD13567.1.
RefSeqiWP_011435125.1. NC_007777.1.
YP_479785.1. NC_007777.1.
YP_480297.1. NC_007777.1.
YP_480881.1. NC_007777.1.
YP_481066.1. NC_007777.1.
YP_481155.1. NC_007777.1.
YP_481427.1. NC_007777.1.
YP_481577.1. NC_007777.1.
YP_481794.1. NC_007777.1.
YP_481886.1. NC_007777.1.
YP_482028.1. NC_007777.1.
YP_482399.1. NC_007777.1.
YP_483192.1. NC_007777.1.
YP_483294.1. NC_007777.1.
YP_483296.1. NC_007777.1.

Genome annotation databases

EnsemblBacteriaiABD10056; ABD10056; Francci3_0672.
ABD10568; ABD10568; Francci3_1189.
ABD11152; ABD11152; Francci3_1776.
ABD11337; ABD11337; Francci3_1962.
ABD11426; ABD11426; Francci3_2052.
ABD11698; ABD11698; Francci3_2330.
ABD11848; ABD11848; Francci3_2481.
ABD12065; ABD12065; Francci3_2704.
ABD12157; ABD12157; Francci3_2799.
ABD12299; ABD12299; Francci3_2941.
ABD12670; ABD12670; Francci3_3313.
ABD13463; ABD13463; Francci3_4115.
ABD13565; ABD13565; Francci3_4218.
ABD13567; ABD13567; Francci3_4220.
KEGGifra:Francci3_0672.
fra:Francci3_1189.
fra:Francci3_1776.
fra:Francci3_1962.
fra:Francci3_2052.
fra:Francci3_2330.
fra:Francci3_2481.
fra:Francci3_2704.
fra:Francci3_2799.
fra:Francci3_2941.
fra:Francci3_3313.
fra:Francci3_4115.
fra:Francci3_4218.
fra:Francci3_4220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD10056.1.
CP000249 Genomic DNA. Translation: ABD10568.1.
CP000249 Genomic DNA. Translation: ABD11152.1.
CP000249 Genomic DNA. Translation: ABD11337.1.
CP000249 Genomic DNA. Translation: ABD11426.1.
CP000249 Genomic DNA. Translation: ABD11698.1.
CP000249 Genomic DNA. Translation: ABD11848.1.
CP000249 Genomic DNA. Translation: ABD12065.1.
CP000249 Genomic DNA. Translation: ABD12157.1.
CP000249 Genomic DNA. Translation: ABD12299.1.
CP000249 Genomic DNA. Translation: ABD12670.1.
CP000249 Genomic DNA. Translation: ABD13463.1.
CP000249 Genomic DNA. Translation: ABD13565.1.
CP000249 Genomic DNA. Translation: ABD13567.1.
RefSeqiWP_011435125.1. NC_007777.1.
YP_479785.1. NC_007777.1.
YP_480297.1. NC_007777.1.
YP_480881.1. NC_007777.1.
YP_481066.1. NC_007777.1.
YP_481155.1. NC_007777.1.
YP_481427.1. NC_007777.1.
YP_481577.1. NC_007777.1.
YP_481794.1. NC_007777.1.
YP_481886.1. NC_007777.1.
YP_482028.1. NC_007777.1.
YP_482399.1. NC_007777.1.
YP_483192.1. NC_007777.1.
YP_483294.1. NC_007777.1.
YP_483296.1. NC_007777.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi106370.Francci3_4220.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD10056; ABD10056; Francci3_0672.
ABD10568; ABD10568; Francci3_1189.
ABD11152; ABD11152; Francci3_1776.
ABD11337; ABD11337; Francci3_1962.
ABD11426; ABD11426; Francci3_2052.
ABD11698; ABD11698; Francci3_2330.
ABD11848; ABD11848; Francci3_2481.
ABD12065; ABD12065; Francci3_2704.
ABD12157; ABD12157; Francci3_2799.
ABD12299; ABD12299; Francci3_2941.
ABD12670; ABD12670; Francci3_3313.
ABD13463; ABD13463; Francci3_4115.
ABD13565; ABD13565; Francci3_4218.
ABD13567; ABD13567; Francci3_4220.
KEGGifra:Francci3_0672.
fra:Francci3_1189.
fra:Francci3_1776.
fra:Francci3_1962.
fra:Francci3_2052.
fra:Francci3_2330.
fra:Francci3_2481.
fra:Francci3_2704.
fra:Francci3_2799.
fra:Francci3_2941.
fra:Francci3_3313.
fra:Francci3_4115.
fra:Francci3_4218.
fra:Francci3_4220.

Phylogenomic databases

eggNOGiCOG5433.
HOGENOMiHOG000041677.
OMAiWETEATW.
OrthoDBiEOG664CH2.

Enzyme and pathway databases

BioCyciFSP106370:GI1F-1211-MONOMER.
FSP106370:GI1F-1808-MONOMER.
FSP106370:GI1F-1994-MONOMER.
FSP106370:GI1F-2085-MONOMER.
FSP106370:GI1F-2363-MONOMER.
FSP106370:GI1F-2514-MONOMER.
FSP106370:GI1F-2738-MONOMER.
FSP106370:GI1F-2833-MONOMER.
FSP106370:GI1F-2975-MONOMER.
FSP106370:GI1F-3355-MONOMER.
FSP106370:GI1F-4172-MONOMER.
FSP106370:GI1F-4276-MONOMER.
FSP106370:GI1F-4278-MONOMER.
FSP106370:GI1F-689-MONOMER.

Family and domain databases

InterProiIPR002559. Transposase_11.
[Graphical view]
PfamiPF01609. DDE_Tnp_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CcI3Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CcI3Imported.

Entry informationi

Entry nameiQ2JDS4_FRASC
AccessioniPrimary (citable) accession number: Q2JDS4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 1, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.