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Q2JDS4 (Q2JDS4_FRASC) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Transposase, IS4 family EMBL ABD10568.1
Gene names
Ordered Locus Names:Francci3_0672, Francci3_1189, Francci3_1776, Francci3_1962, Francci3_2052, Francci3_2330, Francci3_2481, Francci3_2704, Francci3_2799, Francci3_2941, Francci3_3313, Francci3_4115, Francci3_4218, Francci3_4220
OrganismFrankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD10568.1
Taxonomic identifier106370 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransposition, DNA-mediated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

transposase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JDS4 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 9FC9ACD91ABE523A

FASTA43346,349
        10         20         30         40         50         60 
MPVQSRMPVT PTDLGQAGSG QLVRMRRSLR VLGAHGGEVQ GLADVLAGVP DPRDPRGIRH 

        70         80         90        100        110        120 
RLPVILGLSA AAVAAGEKSV EEIAAWAAHA PTQVLTALGA RVHPVTGQPQ APSVDTMIRV 

       130        140        150        160        170        180 
LSAVDSSALA RAVGMFAAAR ARQARGGGRR VVAVDGKTLR GAAGPEGRAP HLLAVAEHGT 

       190        200        210        220        230        240 
GVVLAEHEVG AKTNEVTAFA PLLRELHSHD PLDGVVVTAD ALHTTRAHAD LIVTELGAHF 

       250        260        270        280        290        300 
VFTVKANTPA LSVDCHQATD WTKIPIGHSA EGRAHGRFER RTIQLAQASE AIRARYPHAR 

       310        320        330        340        350        360 
TVARIRRHVR RTVTTGTGRA RVTRTIPSTV TVHVLTSLTL DAVTPADLAG YARGHWTIEN 

       370        380        390        400        410        420 
KVHWVRDVTF REDASRVRTG PLPRIMTTLR NLIIGLIRLA GHNRIAPTIR RIRHDNALLL 

       430 
AILTLDNPAD LHQ

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000249 Genomic DNA. Translation: ABD10056.1.
CP000249 Genomic DNA. Translation: ABD10568.1.
CP000249 Genomic DNA. Translation: ABD11152.1.
CP000249 Genomic DNA. Translation: ABD11337.1.
CP000249 Genomic DNA. Translation: ABD11426.1.
CP000249 Genomic DNA. Translation: ABD11698.1.
CP000249 Genomic DNA. Translation: ABD11848.1.
CP000249 Genomic DNA. Translation: ABD12065.1.
CP000249 Genomic DNA. Translation: ABD12157.1.
CP000249 Genomic DNA. Translation: ABD12299.1.
CP000249 Genomic DNA. Translation: ABD12670.1.
CP000249 Genomic DNA. Translation: ABD13463.1.
CP000249 Genomic DNA. Translation: ABD13565.1.
CP000249 Genomic DNA. Translation: ABD13567.1.
RefSeqYP_479785.1. NC_007777.1.
YP_480297.1. NC_007777.1.
YP_480881.1. NC_007777.1.
YP_481066.1. NC_007777.1.
YP_481155.1. NC_007777.1.
YP_481427.1. NC_007777.1.
YP_481577.1. NC_007777.1.
YP_481794.1. NC_007777.1.
YP_481886.1. NC_007777.1.
YP_482028.1. NC_007777.1.
YP_482399.1. NC_007777.1.
YP_483192.1. NC_007777.1.
YP_483294.1. NC_007777.1.
YP_483296.1. NC_007777.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING106370.Francci3_4220.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD10056; ABD10056; Francci3_0672.
ABD10568; ABD10568; Francci3_1189.
ABD11152; ABD11152; Francci3_1776.
ABD11337; ABD11337; Francci3_1962.
ABD11426; ABD11426; Francci3_2052.
ABD11698; ABD11698; Francci3_2330.
ABD11848; ABD11848; Francci3_2481.
ABD12065; ABD12065; Francci3_2704.
ABD12157; ABD12157; Francci3_2799.
ABD12299; ABD12299; Francci3_2941.
ABD12670; ABD12670; Francci3_3313.
ABD13463; ABD13463; Francci3_4115.
ABD13565; ABD13565; Francci3_4218.
ABD13567; ABD13567; Francci3_4220.
GeneID3903463.
3903756.
3904006.
3904099.
3904324.
3904537.
3904625.
3904694.
3904859.
3904945.
3905260.
3907079.
3907183.
3907185.
KEGGfra:Francci3_0672.
fra:Francci3_1189.
fra:Francci3_1776.
fra:Francci3_1962.
fra:Francci3_2052.
fra:Francci3_2330.
fra:Francci3_2481.
fra:Francci3_2704.
fra:Francci3_2799.
fra:Francci3_2941.
fra:Francci3_3313.
fra:Francci3_4115.
fra:Francci3_4218.
fra:Francci3_4220.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5433.
HOGENOMHOG000041677.
ProtClustDBCLSK720270.

Enzyme and pathway databases

BioCycFSP106370:GI1F-1211-MONOMER.
FSP106370:GI1F-1808-MONOMER.
FSP106370:GI1F-1994-MONOMER.
FSP106370:GI1F-2085-MONOMER.
FSP106370:GI1F-2363-MONOMER.
FSP106370:GI1F-2514-MONOMER.
FSP106370:GI1F-2738-MONOMER.
FSP106370:GI1F-2833-MONOMER.
FSP106370:GI1F-2975-MONOMER.
FSP106370:GI1F-3355-MONOMER.
FSP106370:GI1F-4172-MONOMER.
FSP106370:GI1F-4276-MONOMER.
FSP106370:GI1F-4278-MONOMER.
FSP106370:GI1F-689-MONOMER.

Family and domain databases

InterProIPR002559. Transposase_11.
[Graphical view]
PfamPF01609. DDE_Tnp_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JDS4_FRASC
AccessionPrimary (citable) accession number: Q2JDS4
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 29, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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