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Q2JDS4

- Q2JDS4_FRASC

UniProt

Q2JDS4 - Q2JDS4_FRASC

Protein
Submitted name:

Transposase, IS4 family

Gene

Francci3_0672

Organism
Frankia sp. (strain CcI3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. transposase activity Source: InterPro

    GO - Biological processi

    1. transposition, DNA-mediated Source: InterPro

    Enzyme and pathway databases

    BioCyciFSP106370:GI1F-1211-MONOMER.
    FSP106370:GI1F-1808-MONOMER.
    FSP106370:GI1F-1994-MONOMER.
    FSP106370:GI1F-2085-MONOMER.
    FSP106370:GI1F-2363-MONOMER.
    FSP106370:GI1F-2514-MONOMER.
    FSP106370:GI1F-2738-MONOMER.
    FSP106370:GI1F-2833-MONOMER.
    FSP106370:GI1F-2975-MONOMER.
    FSP106370:GI1F-3355-MONOMER.
    FSP106370:GI1F-4172-MONOMER.
    FSP106370:GI1F-4276-MONOMER.
    FSP106370:GI1F-4278-MONOMER.
    FSP106370:GI1F-689-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transposase, IS4 familyImported
    Gene namesi
    Ordered Locus Names:Francci3_0672Imported, Francci3_1189Imported, Francci3_1776Imported, Francci3_1962Imported, Francci3_2052Imported, Francci3_2330Imported, Francci3_2481Imported, Francci3_2704Imported, Francci3_2799Imported, Francci3_2941Imported, Francci3_3313Imported, Francci3_4115Imported, Francci3_4218Imported, Francci3_4220Imported
    OrganismiFrankia sp. (strain CcI3)Imported
    Taxonomic identifieri106370 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000001937: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi106370.Francci3_4220.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG5433.
    HOGENOMiHOG000041677.
    OMAiCETAILW.
    OrthoDBiEOG664CH2.

    Family and domain databases

    InterProiIPR002559. Transposase_11.
    [Graphical view]
    PfamiPF01609. DDE_Tnp_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2JDS4-1 [UniParc]FASTAAdd to Basket

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    MPVQSRMPVT PTDLGQAGSG QLVRMRRSLR VLGAHGGEVQ GLADVLAGVP    50
    DPRDPRGIRH RLPVILGLSA AAVAAGEKSV EEIAAWAAHA PTQVLTALGA 100
    RVHPVTGQPQ APSVDTMIRV LSAVDSSALA RAVGMFAAAR ARQARGGGRR 150
    VVAVDGKTLR GAAGPEGRAP HLLAVAEHGT GVVLAEHEVG AKTNEVTAFA 200
    PLLRELHSHD PLDGVVVTAD ALHTTRAHAD LIVTELGAHF VFTVKANTPA 250
    LSVDCHQATD WTKIPIGHSA EGRAHGRFER RTIQLAQASE AIRARYPHAR 300
    TVARIRRHVR RTVTTGTGRA RVTRTIPSTV TVHVLTSLTL DAVTPADLAG 350
    YARGHWTIEN KVHWVRDVTF REDASRVRTG PLPRIMTTLR NLIIGLIRLA 400
    GHNRIAPTIR RIRHDNALLL AILTLDNPAD LHQ 433
    Length:433
    Mass (Da):46,349
    Last modified:March 7, 2006 - v1
    Checksum:i9FC9ACD91ABE523A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000249 Genomic DNA. Translation: ABD10056.1.
    CP000249 Genomic DNA. Translation: ABD10568.1.
    CP000249 Genomic DNA. Translation: ABD11152.1.
    CP000249 Genomic DNA. Translation: ABD11337.1.
    CP000249 Genomic DNA. Translation: ABD11426.1.
    CP000249 Genomic DNA. Translation: ABD11698.1.
    CP000249 Genomic DNA. Translation: ABD11848.1.
    CP000249 Genomic DNA. Translation: ABD12065.1.
    CP000249 Genomic DNA. Translation: ABD12157.1.
    CP000249 Genomic DNA. Translation: ABD12299.1.
    CP000249 Genomic DNA. Translation: ABD12670.1.
    CP000249 Genomic DNA. Translation: ABD13463.1.
    CP000249 Genomic DNA. Translation: ABD13565.1.
    CP000249 Genomic DNA. Translation: ABD13567.1.
    RefSeqiWP_011435125.1. NC_007777.1.
    YP_479785.1. NC_007777.1.
    YP_480297.1. NC_007777.1.
    YP_480881.1. NC_007777.1.
    YP_481066.1. NC_007777.1.
    YP_481155.1. NC_007777.1.
    YP_481427.1. NC_007777.1.
    YP_481577.1. NC_007777.1.
    YP_481794.1. NC_007777.1.
    YP_481886.1. NC_007777.1.
    YP_482028.1. NC_007777.1.
    YP_482399.1. NC_007777.1.
    YP_483192.1. NC_007777.1.
    YP_483294.1. NC_007777.1.
    YP_483296.1. NC_007777.1.

    Genome annotation databases

    EnsemblBacteriaiABD10056; ABD10056; Francci3_0672.
    ABD10568; ABD10568; Francci3_1189.
    ABD11152; ABD11152; Francci3_1776.
    ABD11337; ABD11337; Francci3_1962.
    ABD11426; ABD11426; Francci3_2052.
    ABD11698; ABD11698; Francci3_2330.
    ABD11848; ABD11848; Francci3_2481.
    ABD12065; ABD12065; Francci3_2704.
    ABD12157; ABD12157; Francci3_2799.
    ABD12299; ABD12299; Francci3_2941.
    ABD12670; ABD12670; Francci3_3313.
    ABD13463; ABD13463; Francci3_4115.
    ABD13565; ABD13565; Francci3_4218.
    ABD13567; ABD13567; Francci3_4220.
    GeneIDi3903463.
    3903756.
    3904006.
    3904099.
    3904324.
    3904537.
    3904625.
    3904694.
    3904859.
    3904945.
    3905260.
    3907079.
    3907183.
    3907185.
    KEGGifra:Francci3_0672.
    fra:Francci3_1189.
    fra:Francci3_1776.
    fra:Francci3_1962.
    fra:Francci3_2052.
    fra:Francci3_2330.
    fra:Francci3_2481.
    fra:Francci3_2704.
    fra:Francci3_2799.
    fra:Francci3_2941.
    fra:Francci3_3313.
    fra:Francci3_4115.
    fra:Francci3_4218.
    fra:Francci3_4220.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000249 Genomic DNA. Translation: ABD10056.1 .
    CP000249 Genomic DNA. Translation: ABD10568.1 .
    CP000249 Genomic DNA. Translation: ABD11152.1 .
    CP000249 Genomic DNA. Translation: ABD11337.1 .
    CP000249 Genomic DNA. Translation: ABD11426.1 .
    CP000249 Genomic DNA. Translation: ABD11698.1 .
    CP000249 Genomic DNA. Translation: ABD11848.1 .
    CP000249 Genomic DNA. Translation: ABD12065.1 .
    CP000249 Genomic DNA. Translation: ABD12157.1 .
    CP000249 Genomic DNA. Translation: ABD12299.1 .
    CP000249 Genomic DNA. Translation: ABD12670.1 .
    CP000249 Genomic DNA. Translation: ABD13463.1 .
    CP000249 Genomic DNA. Translation: ABD13565.1 .
    CP000249 Genomic DNA. Translation: ABD13567.1 .
    RefSeqi WP_011435125.1. NC_007777.1.
    YP_479785.1. NC_007777.1.
    YP_480297.1. NC_007777.1.
    YP_480881.1. NC_007777.1.
    YP_481066.1. NC_007777.1.
    YP_481155.1. NC_007777.1.
    YP_481427.1. NC_007777.1.
    YP_481577.1. NC_007777.1.
    YP_481794.1. NC_007777.1.
    YP_481886.1. NC_007777.1.
    YP_482028.1. NC_007777.1.
    YP_482399.1. NC_007777.1.
    YP_483192.1. NC_007777.1.
    YP_483294.1. NC_007777.1.
    YP_483296.1. NC_007777.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 106370.Francci3_4220.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD10056 ; ABD10056 ; Francci3_0672 .
    ABD10568 ; ABD10568 ; Francci3_1189 .
    ABD11152 ; ABD11152 ; Francci3_1776 .
    ABD11337 ; ABD11337 ; Francci3_1962 .
    ABD11426 ; ABD11426 ; Francci3_2052 .
    ABD11698 ; ABD11698 ; Francci3_2330 .
    ABD11848 ; ABD11848 ; Francci3_2481 .
    ABD12065 ; ABD12065 ; Francci3_2704 .
    ABD12157 ; ABD12157 ; Francci3_2799 .
    ABD12299 ; ABD12299 ; Francci3_2941 .
    ABD12670 ; ABD12670 ; Francci3_3313 .
    ABD13463 ; ABD13463 ; Francci3_4115 .
    ABD13565 ; ABD13565 ; Francci3_4218 .
    ABD13567 ; ABD13567 ; Francci3_4220 .
    GeneIDi 3903463.
    3903756.
    3904006.
    3904099.
    3904324.
    3904537.
    3904625.
    3904694.
    3904859.
    3904945.
    3905260.
    3907079.
    3907183.
    3907185.
    KEGGi fra:Francci3_0672.
    fra:Francci3_1189.
    fra:Francci3_1776.
    fra:Francci3_1962.
    fra:Francci3_2052.
    fra:Francci3_2330.
    fra:Francci3_2481.
    fra:Francci3_2704.
    fra:Francci3_2799.
    fra:Francci3_2941.
    fra:Francci3_3313.
    fra:Francci3_4115.
    fra:Francci3_4218.
    fra:Francci3_4220.

    Phylogenomic databases

    eggNOGi COG5433.
    HOGENOMi HOG000041677.
    OMAi CETAILW.
    OrthoDBi EOG664CH2.

    Enzyme and pathway databases

    BioCyci FSP106370:GI1F-1211-MONOMER.
    FSP106370:GI1F-1808-MONOMER.
    FSP106370:GI1F-1994-MONOMER.
    FSP106370:GI1F-2085-MONOMER.
    FSP106370:GI1F-2363-MONOMER.
    FSP106370:GI1F-2514-MONOMER.
    FSP106370:GI1F-2738-MONOMER.
    FSP106370:GI1F-2833-MONOMER.
    FSP106370:GI1F-2975-MONOMER.
    FSP106370:GI1F-3355-MONOMER.
    FSP106370:GI1F-4172-MONOMER.
    FSP106370:GI1F-4276-MONOMER.
    FSP106370:GI1F-4278-MONOMER.
    FSP106370:GI1F-689-MONOMER.

    Family and domain databases

    InterProi IPR002559. Transposase_11.
    [Graphical view ]
    Pfami PF01609. DDE_Tnp_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CcI3Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CcI3Imported.

    Entry informationi

    Entry nameiQ2JDS4_FRASC
    AccessioniPrimary (citable) accession number: Q2JDS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 7, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3