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Q2JDQ9

- CLPP1_FRASC

UniProt

Q2JDQ9 - CLPP1_FRASC

Protein

ATP-dependent Clp protease proteolytic subunit 1

Gene

clpP1

Organism
Frankia sp. (strain CcI3)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.UniRule annotation

    Catalytic activityi

    Hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are hydrolyzed (such as succinyl-Leu-Tyr-|-NHMec; and Leu-Tyr-Leu-|-Tyr-Trp, in which cleavage of the -Tyr-|-Leu- and -Tyr-|-Trp bonds also occurs).UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei108 – 1081NucleophileUniRule annotation
    Active sitei133 – 1331UniRule annotation

    GO - Molecular functioni

    1. serine-type endopeptidase activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase, Protease, Serine protease

    Enzyme and pathway databases

    BioCyciFSP106370:GI1F-1229-MONOMER.

    Protein family/group databases

    MEROPSiS14.008.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP-dependent Clp protease proteolytic subunit 1UniRule annotation (EC:3.4.21.92UniRule annotation)
    Alternative name(s):
    Endopeptidase Clp 1UniRule annotation
    Gene namesi
    Name:clpP1UniRule annotation
    Ordered Locus Names:Francci3_1205
    OrganismiFrankia sp. (strain CcI3)
    Taxonomic identifieri106370 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000001937: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 213213ATP-dependent Clp protease proteolytic subunit 1PRO_0000236387Add
    BLAST

    Interactioni

    Subunit structurei

    Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.UniRule annotation

    Protein-protein interaction databases

    STRINGi106370.Francci3_1205.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2JDQ9.
    SMRiQ2JDQ9. Positions 25-203.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the peptidase S14 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0740.
    HOGENOMiHOG000285833.
    KOiK01358.
    OMAiADITIQA.
    OrthoDBiEOG6Z3KQ0.

    Family and domain databases

    Gene3Di3.90.226.10. 1 hit.
    HAMAPiMF_00444. ClpP.
    InterProiIPR001907. ClpP.
    IPR029045. ClpP/crotonase-like_dom.
    IPR023562. ClpP/TepA.
    IPR018215. ClpP_AS.
    [Graphical view]
    PANTHERiPTHR10381. PTHR10381. 1 hit.
    PfamiPF00574. CLP_protease. 1 hit.
    [Graphical view]
    PRINTSiPR00127. CLPPROTEASEP.
    SUPFAMiSSF52096. SSF52096. 1 hit.
    PROSITEiPS00382. CLP_PROTEASE_HIS. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2JDQ9-1 [UniParc]FASTAAdd to Basket

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    MSNIAAPRLP VPGPDLRAPG QGGPAFDDQV FNRLLANRIV FLGSVVEDSI    50
    ANAICAQLLL LNAEDPTRDI FLYINSPGGS VSAGMAIYDT MQFVENDVAT 100
    VSLGLAASMG QFLLCAGASG KRYSLPHARI MMHQPSGGIG GTASDIAIQA 150
    EQMLYTKRMM QERIAFHTGQ PIEQIERDSD RDRWFTAEEA KDYGFVDHVV 200
    QQARQVPSEG PVS 213
    Length:213
    Mass (Da):23,039
    Last modified:March 7, 2006 - v1
    Checksum:iA96C99EFFAB03FAB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000249 Genomic DNA. Translation: ABD10583.1.
    RefSeqiYP_480312.1. NC_007777.1.

    Genome annotation databases

    EnsemblBacteriaiABD10583; ABD10583; Francci3_1205.
    GeneIDi3903559.
    KEGGifra:Francci3_1205.
    PATRICi21925372. VBIFraSp10456_1306.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000249 Genomic DNA. Translation: ABD10583.1 .
    RefSeqi YP_480312.1. NC_007777.1.

    3D structure databases

    ProteinModelPortali Q2JDQ9.
    SMRi Q2JDQ9. Positions 25-203.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 106370.Francci3_1205.

    Protein family/group databases

    MEROPSi S14.008.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD10583 ; ABD10583 ; Francci3_1205 .
    GeneIDi 3903559.
    KEGGi fra:Francci3_1205.
    PATRICi 21925372. VBIFraSp10456_1306.

    Phylogenomic databases

    eggNOGi COG0740.
    HOGENOMi HOG000285833.
    KOi K01358.
    OMAi ADITIQA.
    OrthoDBi EOG6Z3KQ0.

    Enzyme and pathway databases

    BioCyci FSP106370:GI1F-1229-MONOMER.

    Family and domain databases

    Gene3Di 3.90.226.10. 1 hit.
    HAMAPi MF_00444. ClpP.
    InterProi IPR001907. ClpP.
    IPR029045. ClpP/crotonase-like_dom.
    IPR023562. ClpP/TepA.
    IPR018215. ClpP_AS.
    [Graphical view ]
    PANTHERi PTHR10381. PTHR10381. 1 hit.
    Pfami PF00574. CLP_protease. 1 hit.
    [Graphical view ]
    PRINTSi PR00127. CLPPROTEASEP.
    SUPFAMi SSF52096. SSF52096. 1 hit.
    PROSITEi PS00382. CLP_PROTEASE_HIS. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CcI3.

    Entry informationi

    Entry nameiCLPP1_FRASC
    AccessioniPrimary (citable) accession number: Q2JDQ9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Peptidase families
      Classification of peptidase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3