Q2J9Y5 (Q2J9Y5_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Radical SAM EMBL ABD11907.1

Gene names

Ordered Locus Names:

Francci3_2543

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD11907.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	379 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J9Y5 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: CE7F79463DCECEB8	FASTA	379	42,162
	10 20 30 40 50 60 MTTFLDLPHL RPRDDYGHAR MPRRADAPAP EHIDRIAYGR FRNVYLYITE ACQLRCEHCY 70 80 90 100 110 120 MGERLERALK MPLPQITETL RTWRRMGGSK LTILGGEPTL HPNYIEAIRL GRQLGYEDVI 130 140 150 160 170 180 TTTNAQKPAA RKFRQLEPAD FAYVQVSLDG GSAATHDQVR GEGTFDVALE TTAELAGRGF 190 200 210 220 230 240 DTRIICTVNR ANRGDALKLL DLADEIGVSL VKFHVFSTIG TGHGNADMAM GPSAWVTYCD 250 260 270 280 290 300 VINQVAPAYK TRVWYQPTYA RRNQMSRYAA EGYQGCIGRT LDRISIFPDG RCYVCSYLFD 310 320 330 340 350 360 TDLNFARMQD GQVVLNREAN EFDLFTQPLM TSACGGCKAS ACQGGCPAEE VVMGGSSCAA 370 EPDIVPVCRL WKSSAKPED

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CcI3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD11907.1.
RefSeq	YP_481636.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J9Y5.
ModBase	Search...
Protein-protein interaction databases
STRING	106370.Francci3_2543.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD11907; ABD11907; Francci3_2543.
GeneID	3904687.
KEGG	fra:Francci3_2543.
PATRIC	21928294. VBIFraSp10456_2761.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0535.
HOGENOM	HOG000268787.
OMA	FIFPNGR.
ProtClustDB	CLSK712067.
Enzyme and pathway databases
BioCyc	FSP106370:GI1F-2613-MONOMER.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR006638. Elp3/MiaB/NifB. IPR007197. rSAM. [Graphical view]
Pfam	PF04055. Radical_SAM. 1 hit. [Graphical view]
SMART	SM00729. Elp3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2J9Y5_FRASC

Accession

Primary (citable) accession number: Q2J9Y5

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)