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Protein
Submitted name:

Radical SAM

Gene

Francci3_2543

Organism
Frankia sp. (strain CcI3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciFSP106370:GI1F-2576-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Radical SAMImported
Gene namesi
Ordered Locus Names:Francci3_2543Imported
OrganismiFrankia sp. (strain CcI3)Imported
Taxonomic identifieri106370 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000001937 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi106370.Francci3_2543.

Structurei

3D structure databases

ProteinModelPortaliQ2J9Y5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0535.
HOGENOMiHOG000268787.
OMAiEGCVMNK.
OrthoDBiEOG6MPWS9.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR006638. Elp3/MiaB/NifB.
IPR017200. PqqE.
IPR007197. rSAM.
[Graphical view]
PfamiPF04055. Radical_SAM. 1 hit.
[Graphical view]
PIRSFiPIRSF037420. PQQ_syn_pqqE. 1 hit.
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2J9Y5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTFLDLPHL RPRDDYGHAR MPRRADAPAP EHIDRIAYGR FRNVYLYITE
60 70 80 90 100
ACQLRCEHCY MGERLERALK MPLPQITETL RTWRRMGGSK LTILGGEPTL
110 120 130 140 150
HPNYIEAIRL GRQLGYEDVI TTTNAQKPAA RKFRQLEPAD FAYVQVSLDG
160 170 180 190 200
GSAATHDQVR GEGTFDVALE TTAELAGRGF DTRIICTVNR ANRGDALKLL
210 220 230 240 250
DLADEIGVSL VKFHVFSTIG TGHGNADMAM GPSAWVTYCD VINQVAPAYK
260 270 280 290 300
TRVWYQPTYA RRNQMSRYAA EGYQGCIGRT LDRISIFPDG RCYVCSYLFD
310 320 330 340 350
TDLNFARMQD GQVVLNREAN EFDLFTQPLM TSACGGCKAS ACQGGCPAEE
360 370
VVMGGSSCAA EPDIVPVCRL WKSSAKPED
Length:379
Mass (Da):42,162
Last modified:March 7, 2006 - v1
Checksum:iCE7F79463DCECEB8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD11907.1.
RefSeqiWP_011436943.1. NC_007777.1.
YP_481636.1. NC_007777.1.

Genome annotation databases

EnsemblBacteriaiABD11907; ABD11907; Francci3_2543.
KEGGifra:Francci3_2543.
PATRICi21928294. VBIFraSp10456_2761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD11907.1.
RefSeqiWP_011436943.1. NC_007777.1.
YP_481636.1. NC_007777.1.

3D structure databases

ProteinModelPortaliQ2J9Y5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi106370.Francci3_2543.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD11907; ABD11907; Francci3_2543.
KEGGifra:Francci3_2543.
PATRICi21928294. VBIFraSp10456_2761.

Phylogenomic databases

eggNOGiCOG0535.
HOGENOMiHOG000268787.
OMAiEGCVMNK.
OrthoDBiEOG6MPWS9.

Enzyme and pathway databases

BioCyciFSP106370:GI1F-2576-MONOMER.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR006638. Elp3/MiaB/NifB.
IPR017200. PqqE.
IPR007197. rSAM.
[Graphical view]
PfamiPF04055. Radical_SAM. 1 hit.
[Graphical view]
PIRSFiPIRSF037420. PQQ_syn_pqqE. 1 hit.
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CcI3Imported.

Entry informationi

Entry nameiQ2J9Y5_FRASC
AccessioniPrimary (citable) accession number: Q2J9Y5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 27, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.