Q2J9M2 (Q2J9M2_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
FAD linked oxidase-like EMBL ABD12020.1

Gene names

Ordered Locus Names:

Francci3_2658

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD12020.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	584 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 FAD-binding PCMH-type domain. SAAS SAAS016167

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	lipid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	UDP-N-acetylmuramate dehydrogenase activity Inferred from electronic annotation. Source: InterPro alkylglycerone-phosphate synthase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J9M2 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 528E1283E39D8D99	FASTA	584	62,292
	10 20 30 40 50 60 MVTHMKWWGW GKESVSFSPS DKPDLAPFIR THIGLDITRL PAQPPAFADL TIADPVLPEP 70 80 90 100 110 120 LRAALVDAAG AEHVTTDAQA RVVHAYGKSL RDLVRVRNHD LGRLPDVVVY PGDEEAVRAV 130 140 150 160 170 180 LAAALAADAV VIPFGGGTNI SGSLEAPRTE TRPVISVDLG RLDRVLEIDA DARLARVQAG 190 200 210 220 230 240 ALGPGLEEQL AAQGWTLGHF PDSFAHSTLG GWIATRSSGM QSDKYGDIAE ITRAVRVVTP 250 260 270 280 290 300 AGVLVTRPVP SQSTGPSVRE MILGSEGRLG IITEATVQVH RVPEQRVILG YFFPTWDAAL 310 320 330 340 350 360 LAMREIAASE AAPTVTRVSD ANETRFSFAT RKRGSLASSL VSAGMKQYLR RVRRYDLDQM 370 380 390 400 410 420 CLSFIGFEGS PAHVKAQRKL VGAIVARRGG ICVGTGPGQL YDQKKFDTPY IRDFLLGQGA 430 440 450 460 470 480 MADVSETSTS WSQLGPLYRG VVARANKAFA EIGVTGWIMC HLSHSYHSGA CLYFTFAYAS 490 500 510 520 530 540 PVTLEAIDGY DTVKSAIQQG FIEHAGTLSH HHAVGVEHAR WLADDISPAG VRLLTALFDG 550 560 570 580 IDPGRNLNPG KIVPGVDVAP GLADSAGPDS AGPDSVSPAG SDPR

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CcI3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD12020.1.
RefSeq	YP_481749.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J9M2.
ModBase	Search...
Protein-protein interaction databases
STRING	106370.Francci3_2658.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD12020; ABD12020; Francci3_2658.
GeneID	3906331.
KEGG	fra:Francci3_2658.
PATRIC	21928558. VBIFraSp10456_2894.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0277.
HOGENOM	HOG000045443.
OMA	GSAHQSH.
ProtClustDB	CLSK948474.
Enzyme and pathway databases
BioCyc	FSP106370:GI1F-2728-MONOMER.
Family and domain databases
Gene3D	3.30.43.10. 1 hit. 3.30.465.10. 1 hit.
InterPro	IPR025650. Alkyl-DHAP_Synthase. IPR016169. CO_DH_flavot_FAD-bd_sub2. IPR016166. FAD-bd_2. IPR016167. FAD-bd_2_sub1. IPR016164. FAD-linked_Oxase-like_C. IPR004113. FAD-linked_oxidase_C. IPR006094. Oxid_FAD_bind_N. [Graphical view]
PANTHER	PTHR11748:SF3. PTHR11748:SF3. 1 hit.
Pfam	PF02913. FAD-oxidase_C. 1 hit. PF01565. FAD_binding_4. 1 hit. [Graphical view]
SUPFAM	SSF55103. FAD-binding_2. 1 hit. SSF56176. FAD-binding_2. 1 hit.
PROSITE	PS51387. FAD_PCMH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2J9M2_FRASC

Accession

Primary (citable) accession number: Q2J9M2

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)