Q2J967 (Q2J967_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Superoxide dismutase EMBL ABD12175.1
EC=1.15.1.1 EMBL ABD12175.1

Gene names

Ordered Locus Names:

Francci3_2817

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD12175.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABD12175.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J967 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: F06394434981A03A	FASTA	203	22,035
	10 20 30 40 50 60 MATYTLPDLN YDYGALEPSI IGQIVELHHD KHHATYVKGA NDTLEKIAEA RDKGDFGAIV 70 80 90 100 110 120 GLEKTLAFNL SGHILHSIYW ENLSPDGGDK PDGALGEAIA ADFGSFDAFK AQLNAVTTTV 130 140 150 160 170 180 QGSGWGVLAY DATAQRLLIE QVYDHQGNVG VGNTPLLVFD AWEHAWYLQY KNVKVDYVAA 190 200 LWNVVNWADV AARFVKAKGA AAA

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CcI3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD12175.1.
RefSeq	YP_481904.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J967.
SMR	Q2J967. Positions 2-197.
ModBase	Search...
Protein-protein interaction databases
STRING	106370.Francci3_2817.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD12175; ABD12175; Francci3_2817.
GeneID	3904729.
KEGG	fra:Francci3_2817.
PATRIC	21928890. VBIFraSp10456_3061.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013583.
KO	K04564.
OMA	WDSIGQK.
ProtClustDB	CLSK948507.
Enzyme and pathway databases
BioCyc	FSP106370:GI1F-2887-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J967_FRASC

Accession

Primary (citable) accession number: Q2J967

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)