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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Francci3_3501

Organism
Frankia sp. (strain CcI3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciFSP106370:GI1F-3544-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Francci3_3501Imported
OrganismiFrankia sp. (strain CcI3)Imported
Taxonomic identifieri106370 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaFrankialesFrankiaceaeFrankia
ProteomesiUP000001937 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi106370.Francci3_3501.

Structurei

3D structure databases

ProteinModelPortaliQ2J788.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000013757.
OMAiWFDVIDL.
OrthoDBiEOG69GZK9.

Family and domain databases

Gene3Di3.30.450.40. 3 hits.
3.30.565.10. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003594. HATPase_C.
IPR000014. PAS.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 2 hits.
PF13581. HATPase_c_2. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 2 hits.
SM00387. HATPase_c. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 2 hits.
SSF55874. SSF55874. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2J788-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPPGSASPS SGVVPSGQGD VSPGPNPVTR SQGGPSAGPH TNPAPHTNPA
60 70 80 90 100
PRAHPGPNQV PGPKHAPGPE TGPGQDRGAD PELPGLPEGW PMVARPAASA
110 120 130 140 150
VTAEPVTRDV IDGTEPRRAP EAPGMRRSDP AGLPGRVRSA FPLPGHAPGT
160 170 180 190 200
DPAATFVMLD ALFAWAPVGL ALLDRAGRFL RVNDTLARFD RRPVHEHLGR
210 220 230 240 250
TVSELLGDTG QELDALLARV LRTGEPVVDL EVMVATDGSG PPQTWLASWY
260 270 280 290 300
PVNDPQVGLV GVAFVAIDAS GTRAVEGERA RADARYLGLV DAAAVDVFHA
310 320 330 340 350
EGDGALDADL PRLRAFTGRH PAELAGFGWL GVVHPDDRER VGRAWHGAIE
360 370 380 390 400
HGETFEAEFR ISGGGGDRTA MRVVEARIVP MPAAGRPNSR PSEWLGVIRD
410 420 430 440 450
LTEVRAAEAD RATADQRARI ATERAEQTAT LAVALARTLT VDDVVATVLD
460 470 480 490 500
VGGRMAGAAG RGVALVDEAH DRLLFHAPPG PADGLARWSE VALGAVHPVA
510 520 530 540 550
EVMRGGRALF LVDRDELLAR WPVPEVADVA AAAGEHAWAM LPLAVGGGAP
560 570 580 590 600
FGVVTFGFRQ AREFTAADQA SLIAIADACA QALERATGYE QLAADAARGH
610 620 630 640 650
RTLAATREAQ AALALADRRL QLLGRATGIV AAAVEPPVAL RSLAELIVSE
660 670 680 690 700
VADLCVVQLV TGTPAPVPAS WSAAAVSVRA GDAAGDKAGD AAGDKAGAEE
710 720 730 740 750
TAGDRAAEPV PELRPLVVLA RDGLGTVPPF ASGAGAATSP ASPFARAARR
760 770 780 790 800
GERLIVALTA GEWDPPADAE RWIRQVGAHT MAVVPVVRVG HVVAVLSVTA
810 820 830 840 850
VADRPPFTEA DLLLLTELAA RVGVVLDRID RGAAERSNAL ALREALRGSP
860 870 880 890 900
PAVPSGLEVA TRYLPGGVDD DAGSDWFDVI DLGAGRVALM IGNVMGRGIR
910 920 930 940 950
ATAVMGQLRA AARTCARLDL PPAEVLTLLD GIVADLPGEE IATCIYAVVE
960 970 980 990 1000
IDSGVLTLAS AGHPPPLVVA PDGLVSRLYM AVGSPLGVAR SDVTEYTVRL
1010 1020 1030 1040 1050
GRGYLIALFT DGLVRGRARD LDAGVSQLAA ALARASDRFT ANLDDLVTTA
1060 1070 1080 1090 1100
CAGLGPAVAP GPVGSGAADG AADEVAADDV ALLFARLPVE PTAAAALLDV
1110 1120 1130 1140 1150
TFDGAASLRA VRAQARLALE NAPLASEVVD TIVLVLSELA SNAVRHGRPP
1160 1170 1180 1190 1200
LSVRLRLLGD RAVVEVADGG GRVLRRRHAA AEDEAGRGLG LVSQLAVRHG
1210 1220
VRPVPDGKAV WAEIDLTGTT PPEPD
Length:1,225
Mass (Da):126,257
Last modified:March 7, 2006 - v1
Checksum:i62B30C7A78CB9A81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD12854.1.
RefSeqiWP_011437879.1. NC_007777.1.

Genome annotation databases

EnsemblBacteriaiABD12854; ABD12854; Francci3_3501.
KEGGifra:Francci3_3501.
PATRICi21930416. VBIFraSp10456_3818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000249 Genomic DNA. Translation: ABD12854.1.
RefSeqiWP_011437879.1. NC_007777.1.

3D structure databases

ProteinModelPortaliQ2J788.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi106370.Francci3_3501.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD12854; ABD12854; Francci3_3501.
KEGGifra:Francci3_3501.
PATRICi21930416. VBIFraSp10456_3818.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000013757.
OMAiWFDVIDL.
OrthoDBiEOG69GZK9.

Enzyme and pathway databases

BioCyciFSP106370:GI1F-3544-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 3 hits.
3.30.565.10. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003594. HATPase_C.
IPR000014. PAS.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 2 hits.
PF13581. HATPase_c_2. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 2 hits.
SM00387. HATPase_c. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 2 hits.
SSF55874. SSF55874. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CcI3Imported.

Entry informationi

Entry nameiQ2J788_FRASC
AccessioniPrimary (citable) accession number: Q2J788
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.