Q2J709 (Q2J709_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2 HAMAP MF_00291

Gene names

Name:	rpsB HAMAP MF_00291
Ordered Locus Names:	Francci3_3581

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD12933.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family. HAMAP MF_00291

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00291 EMBL ABD12933.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J709 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 89A91E6A5847EDBC	FASTA	289	31,605
	10 20 30 40 50 60 MAVVTMKQLL ESGVHFGHQT KRWNPKMKRY IFTERNGIYI IDLQQTLSYI DRAYDFVKET 70 80 90 100 110 120 VAHGGTVLFI GTKKQAQEAI EEHAARVGMP YVKERWLGGM LTNFSTVYKR LQRLKELEEI 130 140 150 160 170 180 EVTGGTEVRT KKEQLVLTRE KVKLERTLGG IRDMSRVPSA VWVVDTKKEH IAVGEARKLG 190 200 210 220 230 240 IPVVAILDTN CDPDEVDYPI PGNDDAIRSA ALLTRVVADA VADGLMARAG ASSSADAKPE 250 260 270 280 QSAGEEPLAE WEQALLRGEA PAEAPGAVEP ATAEPADGTR PDAAVGTAV

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD12933.1.
RefSeq	YP_482662.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J709.
SMR	Q2J709. Positions 6-226.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J709.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3904135.
GenomeReviews	Gene locus Francci3_3581 in contig CP000249_GR.
KEGG	fra:Francci3_3581.
PATRIC	21930590. VBIFraSp10456_3905.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0052.
HOGENOM	HBG736296.
OMA	KQAQDSV.
PhylomeDB	Q2J709.
ProtClustDB	PRK05299.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2J709_FRASC

Accession

Primary (citable) accession number: Q2J709

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)