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Q2J6Q9

- GLGB_FRASC

UniProt

Q2J6Q9 - GLGB_FRASC

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, Francci3_3681
Organism
Frankia sp. (strain CcI3)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei490 – 4901Nucleophile By similarity
Active sitei543 – 5431Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciFSP106370:GI1F-3729-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Francci3_3681
OrganismiFrankia sp. (strain CcI3)
Taxonomic identifieri106370 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000001937: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8128121,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000260658Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi106370.Francci3_3681.

Structurei

3D structure databases

ProteinModelPortaliQ2J6Q9.
SMRiQ2J6Q9. Positions 201-811.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2J6Q9-1 [UniParc]FASTAAdd to Basket

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MNNGDVNNGT ARTGRLATGL APDRPNPRGA ATAVRNGGGR VALADRDASS    50
ASAQPGQTAD DPAVPSAPPS APPSALPADP PAVAPAVSVD LPYDDLERLV 100
SGAHHDPHAL LGAHPHPGSD ATVVRVLRPD ARAVTVLVGP ARYPATRLHS 150
GGVFGVAVPG MLPDYRIEVT YPDGPYLIDD PYRHLPTLGE MDLHLIIEGR 200
HEQLWKVLGA HPRALTTPGG ATVTGVSFAV WAPSARGVRL VGDFDFWDGR 250
AFPMRSLGRS GIWELFVPGA GTGARYKYEI LGFDGIWRQK ADPLAFHTEV 300
PPATASVVFA SDFTWNDGAW LDRRARTAWR TEPVSVYEVH LGSWRRGLSY 350
RELAEELTAY VVENGFTHVE MLPVAEHPFG GSWGYQVSAY YAPTARFGSP 400
DEFRHLVDTL HRAGIGVIVD WVPAHFPRDT WALGRFDGTP LYEHPDPRRG 450
EQPDWGTYVF DLGRPEVRNF LVANALYWFE EFHIDGLRVD AVASMLYLDY 500
SRPEGGWLPN IHGGRENLDA VSFLQETNAT VYRRFPGAMM IAEESTAWPG 550
VTRPTHLGGL GFGFKWNMGW MHDTLDYNSR LPIHRMYHHH QMTFSMVYAY 600
SENFILPFSH DEVVHGKGSL LRKMPGDRWA QLANLRALLA YMWAHPGKKL 650
LFMGCEFAQD NEWNESASLE WPLLDDPAHA GVADLVRDLN GLYRTVPALY 700
QHDADPAGFS WIDANDAENN VFSFLRWSGE DPAGGVLACV TNFAGIGHEG 750
YRIGLPFPGR WREILNTDGY RYGGGNIGNL GSVQAVEEPH HGLDASATLT 800
LPPLGAIWLS PA 812
Length:812
Mass (Da):89,229
Last modified:March 7, 2006 - v1
Checksum:i7DA0746ADF835D01
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000249 Genomic DNA. Translation: ABD13033.1.
RefSeqiYP_482762.1. NC_007777.1.

Genome annotation databases

EnsemblBacteriaiABD13033; ABD13033; Francci3_3681.
GeneIDi3905365.
KEGGifra:Francci3_3681.
PATRICi21930812. VBIFraSp10456_4011.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000249 Genomic DNA. Translation: ABD13033.1 .
RefSeqi YP_482762.1. NC_007777.1.

3D structure databases

ProteinModelPortali Q2J6Q9.
SMRi Q2J6Q9. Positions 201-811.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 106370.Francci3_3681.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD13033 ; ABD13033 ; Francci3_3681 .
GeneIDi 3905365.
KEGGi fra:Francci3_3681.
PATRICi 21930812. VBIFraSp10456_4011.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci FSP106370:GI1F-3729-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CcI3.

Entry informationi

Entry nameiGLGB_FRASC
AccessioniPrimary (citable) accession number: Q2J6Q9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: March 7, 2006
Last modified: June 11, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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