Q2J6J3 (Q2J6J3_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL ABD13099.1
EC=1.2.4.2 EMBL ABD13099.1

Gene names

Ordered Locus Names:

Francci3_3748

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13099.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	1244 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABD13099.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J6J3 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: FAD297A7C53667A4	FASTA	1,244	135,190
	10 20 30 40 50 60 MTAPTVPASG PDFGPNEWLV FEIYQQFLED PQSVSPEWRE FLSDYHPGAP PAAAGGAGQA 70 80 90 100 110 120 ATAAPNGEVS PDGEVFHTTP VPVKPSAAAP STPAAPVPAS AQPAGPPKQA APADRQAPEA 130 140 150 160 170 180 ATPLRGAAAR VVSNMETSLH IPTATSVRAV PAKLLADNRI VINRHLARSS GGKVSFTHII 190 200 210 220 230 240 GYAMVKALAA HPVMNASYTE VGGKPAVVQP EHINLGLAID LVTPKGRQLV VAAVKKAETL 250 260 270 280 290 300 DFTQFWQAYE DLVRRARTNK LTTDDFTGVT ISLTNPGGIG TVHSVPRLME GQGTIIGVGA 310 320 330 340 350 360 MEYPAEFSGA SANTLAKLAI SKIITLTSTY DHRIIQGAQS GEYLRRMHQL LLGEEGFYDE 370 380 390 400 410 420 IFQSLRVPYE PVRWVADMPV VHEGDLDHNA RVLELIHAYR VRGHLMADTN PLEFAIRSHP 430 440 450 460 470 480 DLDIISHGLT LWDLDREFAV GGFAGHRTMS LRDVLGVLRD SYCRRVGIEY MHIQEPDERA 490 500 510 520 530 540 WIQARVERAA ERPDPAEQLH VLERLGAAEA FESFLQTKYV GQRRFSLEGA ESTIPALDEV 550 560 570 580 590 600 LSRAAGAGMD EVVIGMAHRG RLNVLANIVG KSYRQIFAEF EGYLDPQTAH GSGDVKYHLG 610 620 630 640 650 660 AEGVYTGQDG RTVPVSVVAN PSHLEAVDPV TEGVVRAKQD ILDKGSAGFT VLPVLVHGDA 670 680 690 700 710 720 AFAGQGVVAE TLNLSQLRGY RTGGTVHLVI NNQVGFTTSP DSGRSSVYAT DVARMVQAPI 730 740 750 760 770 780 FHVNGDDPEA CVRVAALAFE YRQAFHKDVV IDLVCYRRRG HNEMDEPSFT QPLMYDTIAS 790 800 810 820 830 840 KRSVRKLYTE ALIGRGDITR EEAEQAMKSY RAELEKAFAQ TRDTTPASSS PQPRIITTPE 850 860 870 880 890 900 EAAAAAAVST AVSDEAVKKV IETQVNLPEG FTVHPRLRPQ VERRAQMVET GLIDWALAET 910 920 930 940 950 960 LAFGTLLLDG RSVRLTGQDS RRGTFGQRHA VLVDRHSAAD HTPLRTLRHG LDGTIVNDGV 970 980 990 1000 1010 1020 GTFYVYDSLL SEFAAMGFEY GYAVARPDML VLWEAQFGDF ANGAQSIIDE FITAGEAKWG 1030 1040 1050 1060 1070 1080 QRSAVTLLLP HGYEGQGPDH SSARIERFLS LCADNNMTVS APSSPASYFH LLRRQALSPV 1090 1100 1110 1120 1130 1140 RRPLVVFTPK SMLRLKAATS TVAELTGGGW QPVIDDGSVT DPSAVRRILL TAGKVYYDLA 1150 1160 1170 1180 1190 1200 AARGKHDDAE RFALLRVEQL YPTPGPELAQ VLERYPNVTD IVWLQEEPAN QGAYPHMALN 1210 1220 1230 1240 LTEFLPGDIR LRRISRRAAA APASGSSKVH EREQQALVEA AFEN

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD13099.1.
RefSeq	YP_482828.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J6J3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J6J3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3906032.
GenomeReviews	Gene locus Francci3_3748 in contig CP000249_GR.
KEGG	fra:Francci3_3748.
PATRIC	21930952. VBIFraSp10456_4080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HBG289950.
OMA	EGDEPAF.
PhylomeDB	Q2J6J3.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J6J3_FRASC

Accession

Primary (citable) accession number: Q2J6J3

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)