Q2J6C1 (Q2J6C1_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cytochrome-c oxidase EMBL ABD13171.1
EC=1.9.3.1 EMBL ABD13171.1

Gene names

Ordered Locus Names:

Francci3_3821

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13171.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	609 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heme-copper respiratory oxidase family. RuleBase RU000370

Ontologies

Keywords
Biological process	Electron transport Respiratory chain RuleBase RU000370 Transport
Cellular component	Membrane
Domain	Transmembrane RuleBase RU000370
Ligand	Heme RuleBase RU000370 Iron Metal-binding
Molecular function	Oxidoreductase RuleBase RU000370 EMBL ABD13171.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	aerobic respiration Inferred from electronic annotation. Source: InterPro electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: InterPro respiratory chain Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	copper ion binding Inferred from electronic annotation. Source: InterPro cytochrome-c oxidase activity Inferred from electronic annotation. Source: EC electron carrier activity Inferred from electronic annotation. Source: InterPro heme binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J6C1 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 516F594B9FF7464E	FASTA	609	67,227
	10 20 30 40 50 60 MTILHQPREP GGAADTGTQP ADIVAAHTRP RTPLLGYLRT TSHKDIAILY AVTSFGFFLF 70 80 90 100 110 120 AGVLAIMMRA ELARPGLQYF SNEQYNQFFT MHGTLMLLMF ATPLAFAFAN FLVPLQIGAP 130 140 150 160 170 180 DVAFPRLNAL SYWFFLFGSL TVIFGFLTPN GAASFGWFAY SPLNSKVYSP GAGSDLWIVG 190 200 210 220 230 240 LAVSGVGTIL GAVNMITTIL TMRAPGMTMF RLPIFCWTFL ATSILVLIAF PVLAAALLAL 250 260 270 280 290 300 EADRRFGAHV FDAANGGALL WQHLFWYFGH PEVYIIALPF FGVISEILPV FSRKPLFGYK 310 320 330 340 350 360 GLVFATIGIA ALSVVVWAHH MFVTGAVLLP FFALMSFLIA VPTGIKFFNW IGTMWRGQLT 370 380 390 400 410 420 FETPMLFAIG FLVTFLFGGL TGVLLASPPI DFHVSDSYFV VAHFHYVVFG TVVFAAYGGT 430 440 450 460 470 480 YFWFPKVTGR LMNDRLGKIH FWTVFLGFHT TFLVQHWLGV QGMPRRYADY GPNDGFTTLN 490 500 510 520 530 540 TISSAGSFLL ALSTLPFIYN LWHSYRKGPL AVVDDPWGYG NSLEWATSCP PPRHNFRTLP 550 560 570 580 590 600 RIRSERPAFD LHYPQAAGRI DYHATPEITL TPETTPRPET ADPAESTAAE STAAGPDRPA PESGFRTPE

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CcI3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD13171.1.
RefSeq	YP_482900.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J6C1.
ModBase	Search...
Protein-protein interaction databases
STRING	106370.Francci3_3821.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD13171; ABD13171; Francci3_3821.
GeneID	3905569.
KEGG	fra:Francci3_3821.
PATRIC	21931116. VBIFraSp10456_4161.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0843.
HOGENOM	HOG000085274.
KO	K02274.
OMA	FLIGGIM.
ProtClustDB	CLSK2527487.
Enzyme and pathway databases
BioCyc	FSP106370:GI1F-3891-MONOMER.
Family and domain databases
Gene3D	1.20.210.10. 1 hit.
InterPro	IPR000883. Cyt_c_Oxase_su1. IPR023615. Cyt_c_Oxase_su1_BS. IPR023616. Cyt_c_Oxase_su1_dom. IPR014241. Cyt_c_oxidase_su1_bac. [Graphical view]
PANTHER	PTHR10422. PTHR10422. 1 hit.
Pfam	PF00115. COX1. 1 hit. [Graphical view]
PRINTS	PR01165. CYCOXIDASEI.
SUPFAM	SSF81442. COX1. 1 hit.
TIGRFAMs	TIGR02891. CtaD_CoxA. 1 hit.
PROSITE	PS50855. COX1. 1 hit. PS00077. COX1_CUB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2J6C1_FRASC

Accession

Primary (citable) accession number: Q2J6C1

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)