Q2J6B8 (Q2J6B8_FRASC) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 42.
History...
Clusters with 
Names and origin
| Protein names | Submitted name: 4-aminobutyrate aminotransferase apoenzyme EMBL ABD13174.1 EC=2.6.1.19 EMBL ABD13174.1 | ||
| Gene names |
| ||
| Organism | Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13174.1 | ||
| Taxonomic identifier | 106370 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia |
Protein attributes
| Sequence length | 475 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Aminotransferase EMBL ABD13174.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | 4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y.  Benson D.R.Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000249 Genomic DNA. Translation: ABD13174.1. |
| RefSeq | YP_482903.1. NC_007777.1. |
3D structure databases | |
| ProteinModelPortal | Q2J6B8. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q2J6B8. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 3905572. |
| GenomeReviews | Gene locus Francci3_3824 in contig CP000249_GR. |
| KEGG | fra:Francci3_3824. |
| PATRIC | 21931124. VBIFraSp10456_4165. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0160. |
| HOGENOM | HBG725944. |
| OMA | WDKEGRR. |
| PhylomeDB | Q2J6B8. |
| ProtClustDB | PRK06058. |
Family and domain databases | |
| InterPro | IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view] |
| Gene3D | G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit. |
| KO | K07250. |
| PANTHER | PTHR11986. Aminotrans_3. 1 hit. |
| Pfam | PF00202. Aminotran_3. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR00700. GABAtrnsam. 1 hit. |
| PROSITE | PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q2J6B8_FRASC | ||||||||
| Accession | Primary (citable) accession number: Q2J6B8 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||