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Q2J5Z1 (PTH_FRASC) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Peptidyl-tRNA hydrolase
Short name=PTH
EC=3.1.1.29
Gene names
Name:pth
Ordered Locus Names:Francci3_3951
OrganismFrankia sp. (strain CcI3) [Complete proteome] [HAMAP]
Taxonomic identifier106370 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length197 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083

Catalytic activity

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083

Subunit structure

Monomer By similarity. HAMAP MF_00083

Subcellular location

Cytoplasm By similarity HAMAP MF_00083.

Sequence similarities

Belongs to the PTH family.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionaminoacyl-tRNA hydrolase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 197197Peptidyl-tRNA hydrolase HAMAP MF_00083
PRO_0000264041

Sequences

Sequence LengthMass (Da)Tools
Q2J5Z1 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: DBAD156FDA966859

FASTA19721,289
        10         20         30         40         50         60 
MMITPTGDGP WLVAGLGNPG PTYAGNRHNA GFMVVDLLAE RTGSRLKSHR SRADVAETRL 

        70         80         90        100        110        120 
AGARAVLARP LSFMNLSGGP VAAARSFYKV EVSRLIVVHD ELDIPFGAVR LKRGGGDNGH 

       130        140        150        160        170        180 
NGLRSISSAL GTRDYLRVRV GIGRPPGRMD PADFVLRDFT STERRELPLL LEHAADSVEM 

       190 
LIADGLEPAQ NRYHALL

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000249 Genomic DNA. Translation: ABD13301.1.
RefSeqYP_483030.1. NC_007777.1.

3D structure databases

ProteinModelPortalQ2J5Z1.
SMRQ2J5Z1. Positions 9-196.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2J5Z1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3906910.
GenomeReviewsGene locus Francci3_3951 in contig CP000249_GR.
KEGGfra:Francci3_3951.
PATRIC21931380. VBIFraSp10456_4292.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0193.
HOGENOMHBG610927.
OMAIKFKTGG.
PhylomeDBQ2J5Z1.
ProtClustDBPRK05426.

Enzyme and pathway databases

BioCycFSP106370:FRANCCI3_3951-MONOMER.

Family and domain databases

HAMAPMF_00083. Pept_tRNA_hydro_bact.
[Tree]
InterProIPR001328. Pept_tRNA_hydro.
IPR018171. Pept_tRNA_hydro_CS.
[Graphical view]
Gene3DG3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
KOK01056.
PANTHERPTHR17224. Pept_tRNA_hydro. 1 hit.
PfamPF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view]
SUPFAMSSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMsTIGR00447. Pth. 1 hit.
PROSITEPS01195. PEPT_TRNA_HYDROL_1. 1 hit.
PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePTH_FRASC
AccessionPrimary (citable) accession number: Q2J5Z1
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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