Q2J5Y4 (Q2J5Y4_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase EMBL ABD13308.1
EC=2.7.1.148 EMBL ABD13308.1

Gene names

Ordered Locus Names:

Francci3_3958

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13308.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	343 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Kinase EMBL ABD13308.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	terpenoid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity Inferred from electronic annotation. Source: EC ATP binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J5Y4 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 16F0BE001A073B25	FASTA	343	34,334
	10 20 30 40 50 60 MRAPAKVNLH LGVGPLRPDG YHDVITVLQA VSLFDDVSAT SVDPPRFHDP GPSTTDGNGG 70 80 90 100 110 120 SDGNGRSSGD IVVTVEVSGE GADPASLGPA TSTPEVSIVP TGRDNIAVRA AHLVAEAAGI 130 140 150 160 170 180 TSERVHLTLT KGIPVAAGMA GGSADAAAAL VACDALWQTG LDRATLTRLA AQLGSDVPFP 190 200 210 220 230 240 LAGGTALGTG RGEQLTDVLA TGEYYWVFAL ADGGLSTPAV YKEFDRLTEG KLRTGPTPAD 250 260 270 280 290 300 DVLAALRTGD PGQLGAALVN DLQPAALRLR PSLRRVLEAG RELGAVGAIV SGSGPTCAFL 310 320 330 340 TAGAQESIAL AASLAGMGVA RAVRRASGPA SGARMVEGAG EAP

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD13308.1.
RefSeq	YP_483037.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J5Y4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J5Y4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3906917.
GenomeReviews	Gene locus Francci3_3958 in contig CP000249_GR.
KEGG	fra:Francci3_3958.
PATRIC	21931398. VBIFraSp10456_4301.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1947.
HOGENOM	HBG734593.
OMA	TGRDNIA.
PhylomeDB	Q2J5Y4.
ProtClustDB	PRK03188.
Family and domain databases
HAMAP	MF_00061. IspE. [Tree]
InterPro	IPR006204. GHMP_kinase. IPR013750. GHMP_kinase_C. IPR004424. IspE. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. [Graphical view]
Gene3D	G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 2 hits.
KO	K00919.
PANTHER	PTHR20861:SF2. IspE. 1 hit.
Pfam	PF08544. GHMP_kinases_C. 1 hit. PF00288. GHMP_kinases_N. 1 hit. [Graphical view]
PIRSF	PIRSF010376. IspE. 1 hit.
SUPFAM	SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J5Y4_FRASC

Accession

Primary (citable) accession number: Q2J5Y4

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)