Q2J4U7 (Q2J4U7_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Deoxycytidine triphosphate deaminase HAMAP MF_00146
Short name=dCTP deaminase HAMAP MF_00146
EC=3.5.4.13 HAMAP MF_00146

Gene names

Name:	dcd HAMAP MF_00146
Ordered Locus Names:	Francci3_4349

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13695.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	211 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	dCTP + H2O = dUTP + NH3. HAMAP MF_00146
Pathway	Pyrimidine metabolism; dUMP biosynthesis; dUMP from dCTP (dUTP route): step 1/2. HAMAP MF_00146
Sequence similarities	Belongs to the dCTP deaminase family. HAMAP MF_00146

Ontologies

Keywords
Biological process	Nucleotide metabolism HAMAP MF_00146
Molecular function	Hydrolase HAMAP MF_00146 EMBL ABD13695.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	dUTP biosynthetic process Inferred from electronic annotation. Source: InterPro pyrimidine ribonucleotide biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	dCTP deaminase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J4U7 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: EC2FD330DEF4DC4E	FASTA	211	23,324
	10 20 30 40 50 60 MKIDRSCSNV RDVLLSDRDI RTEIATGRIR LDPHDPGLIQ PSSIDLRLDR WFRVFANHRY 70 80 90 100 110 120 SHIDPSLEQE DLTELIAPEG DEPFVLHPGE FVLGSTLEIV TLPDDLAGRL EGKSSLGRLG 130 140 150 160 170 180 LLTHSTAGFI DPGFSGHVTL ELSNVATLPI KLWPGMKIGQ LCLFRLSSPA EHSYGSTIYG 190 200 210 SRYQGQRGPT PSRAYRDFTR APVPNGEIPP G

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD13695.1.
RefSeq	YP_483424.2. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J4U7.
SMR	Q2J4U7. Positions 13-201.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J4U7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3907321.
GenomeReviews	Gene locus Francci3_4349 in contig CP000249_GR.
KEGG	fra:Francci3_4349.
PATRIC	21932273. VBIFraSp10456_4730.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0717.
HOGENOM	HBG553199.
OMA	HTAAYID.
PhylomeDB	Q2J4U7.
ProtClustDB	PRK00416.
Family and domain databases
HAMAP	MF_00146. dCTP_deaminase. [Tree]
InterPro	IPR011962. dCTP_deam. IPR008180. dUTP_pyroPase. [Graphical view]
KO	K01494.
Pfam	PF00692. dUTPase. 1 hit. [Graphical view]
TIGRFAMs	TIGR02274. DCTP_deam. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J4U7_FRASC

Accession

Primary (citable) accession number: Q2J4U7

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)