Q2J4K4 (Q2J4K4_FRASC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase 15-related EMBL ABD13788.1

Gene names

Ordered Locus Names:

Francci3_4442

Organism

Frankia sp. (strain CcI3) [Complete proteome] [HAMAP] EMBL ABD13788.1

Taxonomic identifier

106370 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	635 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABD13788.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	glucan 1,4-alpha-glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J4K4 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 72C4EF7DAD482850	FASTA	635	71,402
	10 20 30 40 50 60 MAHSPVRRSG GSPFPPIAEY GFLSDCETSC LVAPSGNVEW MCVPRPDAPS VFGSVLDRSA 70 80 90 100 110 120 GGFRFGPERT QIPAGRRYLP GTNILETTWQ TPNGWLIVTD CLVVGRWHRT HKRSNTHRRT 130 140 150 160 170 180 PSDWDADHVL LRLARCEHGS VDLSLVCEPN FDYGREPESW QYEGEDYSSG VISHAGTNVT 190 200 210 220 230 240 LRLRTDLRLG FDGRRALART TLREGDTAFV ALTWRPEEPL LPDTYLQACV AVDRTTEFWR 250 260 270 280 290 300 QWLSRGMFPD HPWRRHLQRS ALALKGLTYA PTGALLAAST TSLPETPRGE RNWDYRYSWI 310 320 330 340 350 360 RDSTFALWGL YTLGLDYEAN DFFSFIADVA ENDDDDIQVM YRVSGEPKID EEVLGHLSGY 370 380 390 400 410 420 EGAYPVRIGN AAALQRQHDV WGVVLDSVYL HTKSRDYLSE RLWPVLVRLV EAAATHWREP 430 440 450 460 470 480 DRGMWEVRGA PQHFTVSKMM CWVALDRGRR LAQMRGDAKT AARWRAVAEE IHAEVCEKGV 490 500 510 520 530 540 DHRGVFTQYY GSKALDASLL LIPLLGFLPA ADERVKATVL AIADELTVDG LVLRYRTEET 550 560 570 580 590 600 DDGVSGTEGA FLICSFWLVS ALVEIGELTR ARQLCERLLS LASPLDLYAE EIDPVSGRHL 610 620 630 GNFPQAFTHL ALINAVMYVI RAEDAEAYAR PSPST

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000249 Genomic DNA. Translation: ABD13788.1.
RefSeq	YP_483517.1. NC_007777.1.
3D structure databases
ProteinModelPortal	Q2J4K4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J4K4.
Protein family/group databases
CAZy	GH15. Glycoside Hydrolase Family 15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3907418.
GenomeReviews	Gene locus Francci3_4442 in contig CP000249_GR.
KEGG	fra:Francci3_4442.
PATRIC	21932493. VBIFraSp10456_4839.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3387.
HOGENOM	HBG553151.
OMA	VEWMCVP.
PhylomeDB	Q2J4K4.
ProtClustDB	CLSK872058.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR011613. Glyco_hydro_15. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF00723. Glyco_hydro_15. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J4K4_FRASC

Accession

Primary (citable) accession number: Q2J4K4

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)