Q2J466 (Q2J466_RHOP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase HAMAP MF_00277
Short name=PII uridylyl-transferase HAMAP MF_00277
EC=2.7.7.59 HAMAP MF_00277

Alternative name(s):
UTase HAMAP MF_00277
Uridylyl-removing enzyme HAMAP MF_00277

Gene names

Name:	glnD HAMAP MF_00277
Ordered Locus Names:	RPB_0032

Organism

Rhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] EMBL ABD04744.1

Taxonomic identifier

316058 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	932 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein By similarity. HAMAP MF_00277 SAAS SAAS002912
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP MF_00277 SAAS SAAS002912
Sequence similarities	Belongs to the glnD family. HAMAP MF_00277

Ontologies

Keywords
Biological process	Nitrogen fixation HAMAP MF_00277
Molecular function	Nucleotidyltransferase HAMAP MF_00277 SAAS SAAS002912 EMBL ABD04744.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2J466 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 0C54AE311212F69D	FASTA	932	105,137
	10 20 30 40 50 60 MDKVVTPQRP AADERFDTTR ITADIAALAG QHAGNEPTFR TALAQLMKAE LAKARAAAEA 70 80 90 100 110 120 QLLRDRHGRR CAEHLCFVQD EIIRLLFMAA TQYLYNSPTP SSSERMSVVA TGGYGRGLMA 130 140 150 160 170 180 PESDIDLLFI LPYKQTAWGE QVAEVILYCL WDIGLKVGHA TRSVDESIRQ ARADMTIRTA 190 200 210 220 230 240 ILETRFLTGD KALYQELVDR FDKEVVEGTA AEFVTAKLAE REERHRRSGQ SRYLVEPNVK 250 260 270 280 290 300 DGKGGLRDLH TLFWIAKYVY RVRGTSELLE HGVFDQIEFR TFRRCEDFLW SVRCNLHFVT 310 320 330 340 350 360 RRAEERLSFD LQREIGVRLG YTSHPGMQDV ERFMKHYFLI AKKVGNLTAI LCAKLEDQQA 370 380 390 400 410 420 KPAPALSRMM ARLRPGATRR RVPESDDFVI DNNRINCAMP DVFKHDPVNL IRIFRLAQKN 430 440 450 460 470 480 NLAFHPDAMR TVTRSLALIN AQLRDDPEAN RLFIEILTSD NAEQVLRRMN ETGVLGRFIR 490 500 510 520 530 540 AFGRIVSMMQ FNMYHSYTVD EHLLRCVGNL QEIERGGNDE FILSSDLIRK IRPDHRAVLY 550 560 570 580 590 600 VAVLLHDIAK GQPEDHSTAG AKVARRLCPR FGFNAADTEL IAWLIDKHLV MSTVAQSRDL 610 620 630 640 650 660 SDRKTIENFA AVVESVEQMK LLTILTTADI RGVGPGVWNG WKAQLLRTLY YETEPVLTGG 670 680 690 700 710 720 FSEVNRAERI RGAQAEFRAN FTEWPAAELD AYVARHYPAY WLKVELARKI RHARFLRASE 730 740 750 760 770 780 QAGHKLAVNV GFDEARGVTE LTILAVDHPW LLSIIAGACA SAGANIVDAQ IYTTTDGRAL 790 800 810 820 830 840 DTISISREYD RDEDEGRRAT RIGEMIEEVL EGKLRLPEAV ARRATNGRAK LRAFVVEPEV 850 860 870 880 890 900 SINNNWSDRY TVIEVSGLDR PGLLYQLTTA ISKLNLNIAS AHVATFGERA RDVFYVTDLL 910 920 930 GAQITAPTRQ AAIKRALVHL LANGDAEQQP AA

References

[1]

"Complete sequence of Rhodopseudomonas palustris HaA2." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. , Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HaA2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000250 Genomic DNA. Translation: ABD04744.1.
RefSeq	YP_483655.1. NC_007778.1.
3D structure databases
ProteinModelPortal	Q2J466.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2J466.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3909715.
GenomeReviews	Gene locus RPB_0032 in contig CP000250_GR.
KEGG	rpb:RPB_0032.
PATRIC	23294449. VBIRhoPal125544_0034.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HBG687872.
OMA	MQHDLFH.
ProtClustDB	PRK05092.
Enzyme and pathway databases
BioCyc	RPAL316058:RPB_0032-MONOMER.
Family and domain databases
HAMAP	MF_00277. PII_uridylyl_transf. [Tree]
InterPro	IPR002912. ACT-bd. IPR010043. GlnD_Uridyltrans. IPR023279. HD. IPR003607. Metal-dep_PHydrolase_HD_dom. IPR006674. Metal-dep_PHydrolase_HD_sub. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
Gene3D	G3DSA:1.10.3210.10. HD. 1 hit.
KO	K00990.
PANTHER	PTHR13734:SF1. GlnD_Uridyltrans. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2J466_RHOP2

Accession

Primary (citable) accession number: Q2J466

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)