Q2J0J8 (AROE_RHOP2) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 62.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase EC=1.1.1.25 | ||||
| Gene names |
| ||||
| Organism | Rhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 316058 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › ![]() |
Protein attributes
| Sequence length | 280 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP-Rule MF_00222 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP-Rule MF_00222 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis |
| Ligand | NADP |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP chorismate biosynthetic processInferred from electronic annotation. Source: UniProtKB-UniPathway shikimate metabolic processInferred from electronic annotation. Source: InterPro |
| Molecular_function | NADP binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 280 | 280 | Shikimate dehydrogenase HAMAP-Rule MF_00222 | PRO_1000021321 | |||||
Regions | |||||||||
| Nucleotide binding | 131 – 135 | 5 | NADP By similarity | ||||||
Sites | |||||||||
| Active site | 71 | 1 | Proton acceptor Potential | ||||||
Sequences
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References
| [1] | "Complete sequence of Rhodopseudomonas palustris HaA2." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. Richardson P.Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HaA2. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000250 Genomic DNA. Translation: ABD06012.1. |
| RefSeq | YP_484923.1. NC_007778.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 2GPT based on UniProtKB Q9SQT8. |
| ProteinModelPortal | Q2J0J8. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 316058.RPB_1302. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ABD06012; ABD06012; RPB_1302. |
| GeneID | 3908175. |
| KEGG | rpb:RPB_1302. |
| PATRIC | 23297165. VBIRhoPal125544_1378. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0169. |
| HOGENOM | HOG000237875. |
| KO | K00014. |
| OMA | MAGHPPL. |
| ProtClustDB | CLSK820486. |
Enzyme and pathway databases | |
| BioCyc | RPAL316058:GHF1-1362-MONOMER. |
| UniPathway | UPA00053; UER00087. |
Family and domain databases | |
| Gene3D | 3.40.50.720. 1 hit. |
| HAMAP | MF_00222. Shikimate_DH_AroE. |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR011342. Shikimate_DH. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00507. aroE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | AROE_RHOP2 | ||||||||
| Accession | Primary (citable) accession number: Q2J0J8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
