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Q2IYW9 (Q2IYW9_RHOP2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPB_1883 EMBL ABD06591.1
OrganismRhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] EMBL ABD06591.1
Taxonomic identifier316058 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length1100 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2IYW9 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 93D69A4E13E97A14

FASTA1,100125,023
        10         20         30         40         50         60 
MNVMSPIDST DSRAQADATN ELWYKDAIIY QLHVKAFADS NNDGIGDFAG LTEKLDYLQD 

        70         80         90        100        110        120 
LGVTALWLLP FYPSPQRDDG YDIADYGSIN PDFGTMKDFR RFIVEAKKRN LRVITELVIN 

       130        140        150        160        170        180 
HTSDQHDWFK RARRSGKGSS ARDWYVWSDS DQKYQGTRII FTDTEKSNWT WDPEAGQYYW 

       190        200        210        220        230        240 
HRFFSHQPDL NFDNPHVVGA VVKVMKRWLD TGVDGFRLDA IPYLCERDGT NNENLPETHA 

       250        260        270        280        290        300 
VIKTLRAELD AYAKGKVLLA EANQWPEDVQ EYFGDSDECH MAYHFPLMPR IYMAIAQEDR 

       310        320        330        340        350        360 
FPITDIMRQT PEIPANCQWA MFLRNHDELT LEMVTDVERD YLWTTYAADP RARINVGIRR 

       370        380        390        400        410        420 
RLAPLMDNDR RKIELMNSLL LSFPGTPIIY YGDEIGMGDN IYLGDRNGVR TPMQWSSDRN 

       430        440        450        460        470        480 
GGFSRADPAR LYAPPIMDPV YGYASVNVEA QARSLSSLLS ATKRLISVRK STLAFGRGTM 

       490        500        510        520        530        540 
TFIRPVNRSV LSYVRQYEDE VILCVANLSR SAQATELDLS PWKDRVPQEM LGRTKFPAIG 

       550        560        570        580        590        600 
ELPYMITLAP YGFYWFKLEE RDTSEHVAPA ATVPEFETLV VPLGSTWMTL ARTRGVFERD 

       610        620        630        640        650        660 
VLPAYLSRTR WFPERSPRAI QPHLTSAIPF SITHDNRPWL TFFEATVRGV NTRYVLPMQI 

       670        680        690        700        710        720 
DWVRFDRERY NPRAFAAVRQ GAREGTLLDV AADTEFTTLL LDNLRESLVV ENDGDRLEFR 

       730        740        750        760        770        780 
PGSRLADKPA GPYNHIRAVD TEQSNSTALV DESYVVKLYR RLESGINPEI EMGRFLSEVA 

       790        800        810        820        830        840 
GYSNTPSLLG SVELVEGDKV SAIAVVHDFV ANQGDGWTVT SGYLDRYVDD QRLLINTEED 

       850        860        870        880        890        900 
SASDELAPYL RYMQQTGKRV AEMHIALAGH PEVDDFAPVP IADDDARSWT EAVTANAGRV 

       910        920        930        940        950        960 
LDELARKRDG LRDADRALID DLLAQRNGLS EGLRGLFGSA GGLKIRHHGD FHLGQMLIVK 

       970        980        990       1000       1010       1020 
DDIFIIDFEG EPRRSQAERR AKAPAARDVA GLIRSIDYST TAALERAQKA LVDESGKIAA 

      1030       1040       1050       1060       1070       1080 
ALDVWRTRST EAFLAAYRET MADSPVWPVD RAAADQILDF FLIEKALYEI EYELAYRPDW 

      1090       1100 
LRVPLAGILR ILTRQPEENS 

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References

[1]"Complete sequence of Rhodopseudomonas palustris HaA2."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. expand/collapse author list , Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HaA2 EMBL ABD06591.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000250 Genomic DNA. Translation: ABD06591.1.
RefSeqYP_485502.1. NC_007778.1.

3D structure databases

ProteinModelPortalQ2IYW9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316058.RPB_1883.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD06591; ABD06591; RPB_1883.
GeneID3908078.
KEGGrpb:RPB_1883.
PATRIC23298371. VBIRhoPal125544_1979.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycRPAL316058:GHF1-1903-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2IYW9_RHOP2
AccessionPrimary (citable) accession number: Q2IYW9
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)