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Q2IX12 (Q2IX12_RHOP2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribonucleoside-diphosphate reductase class II EMBL ABD07248.1
EC=1.17.4.- EMBL ABD07248.1
Gene names
Ordered Locus Names:RPB_2544
OrganismRhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] EMBL ABD07248.1
Taxonomic identifier316058 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length1257 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2IX12 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: E84E8005F9D5A31C

FASTA1,257137,900
        10         20         30         40         50         60 
MKIERRYTTD GQSPYAAIQF RLRTSEIRNP DGSVVFRLEN VEVPEGWSQV ASDVLAQKYF 

        70         80         90        100        110        120 
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LAALPEAERF TSEHSSKQVF DRLAGCWTYW 

       130        140        150        160        170        180 
GWKGDYFSSE DDARAFYDEL RYMLASQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDYK 

       190        200        210        220        230        240 
TGKLTKSKSA YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG 

       250        260        270        280        290        300 
EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI EAYIDWKVKE 

       310        320        330        340        350        360 
EQKVAALVTG SKLNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKI ARRALVTDAM 

       370        380        390        400        410        420 
IKRVIQYAKQ GYKEIDFPIY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLT 

       430        440        450        460        470        480 
SRTTKKVMKT VKARDLWEKI GTAAWASADP GLHFNSTMND WHTCKASGDI RASNPCSEYM 

       490        500        510        520        530        540 
FLDDTACNLA SANLLTFYDT TANVFDLPAY EHLCRLWTVV LEISVLMAQF PSKQIAELSY 

       550        560        570        580        590        600 
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GVSYATSAEM AAKLGPFPGY 

       610        620        630        640        650        660 
KKNAAHMLRV IRNHRRAAHG ESRGYEALSV APVPLDHAGC PIPEAIAHAK AAWDKALELG 

       670        680        690        700        710        720 
ELHGYRNAQT TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPAALR 

       730        740        750        760        770        780 
ILGYPENQIA EIEAYAVGHG SLSNAPAINR STLKAKGFTD EALAKVEAAL PTAFDIKFAF 

       790        800        810        820        830        840 
NKWTFGEDFL RETLKLDAEA IAAPNFDLLA AIGFSKREIE AANIHICGAM TVEGAPHLKA 

       850        860        870        880        890        900 
EHYSVFDCAN PCGKVGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM 

       910        920        930        940        950        960 
LSWKLALKAN ALYRDGSKLS QPLNSQLIAD DDEDDDALDN FLEKPMAART AQISEKVVER 

       970        980        990       1000       1010       1020 
LVERIVVMRE REKMPDRRKG YTQKAVVGGH KVYLRTGEYD DGRIGEIFID MHKEGAALRS 

      1030       1040       1050       1060       1070       1080 
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS 

      1090       1100       1110       1120       1130       1140 
YMGRFDLAHV DPSETGFDAI GKGVDEGKAP EGTPSGQHAA TKYLSKGLTR SRTDNLVVMR 

      1150       1160       1170       1180       1190       1200 
STPATPDAGS SPVKMAYSQP DSHAKSTSRI GDVLEGATAL KQEADHDLSP TEKLEALQWS 

      1210       1220       1230       1240       1250 
RAGAAQAQPA ASKAERRAEA KARGYEGDSC GECGNFTLVR NGTCMKCDTC GSTTGCS

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References

[1]"Complete sequence of Rhodopseudomonas palustris HaA2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. expand/collapse author list , Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HaA2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000250 Genomic DNA. Translation: ABD07248.1.
RefSeqYP_486159.1. NC_007778.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ2IX12.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3910333.
GenomeReviewsGene locus RPB_2544 in contig CP000250_GR.
KEGGrpb:RPB_2544.
PATRIC23299785. VBIRhoPal125544_2678.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0209.
HOGENOMHBG414188.
OMAFLWRSVP.
PhylomeDBQ2IX12.
ProtClustDBPRK07562.

Enzyme and pathway databases

BioCycRPAL316058:RPB_2544-MONOMER.

Family and domain databases

InterProIPR002876. DUF28.
IPR017856. Integrase_Zn-bd_dom-like_N.
IPR013344. RDP_Rdtase_AdoCbl-dep.
IPR000788. Ribncl_red_lg_C.
IPR013678. Ribonuc_red_2_N.
IPR024434. TSCPD_dom.
[Graphical view]
Gene3DG3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KOK00525.
PfamPF08471. Ribonuc_red_2_N. 1 hit.
PF02867. Ribonuc_red_lgC. 2 hits.
PF12637. TSCPD. 1 hit.
[Graphical view]
PRINTSPR01183. RIBORDTASEM1.
SUPFAMSSF75625. DUF28. 1 hit.
TIGRFAMsTIGR02504. NrdJ_Z. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2IX12_RHOP2
AccessionPrimary (citable) accession number: Q2IX12
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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