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Q2IW50 (Q2IW50_RHOP2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPB_2858
OrganismRhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] EMBL ABD07560.1
Taxonomic identifier316058 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length558 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2IW50 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: CD3A074697583FF0

FASTA55861,538
        10         20         30         40         50         60 
MPLADCLRAG NRRSFWRTEP ISFRTPLALL PISLGIIFGV WWWIATPVDL ARAPIDPNDK 

        70         80         90        100        110        120 
LECVSYAPFR GAQTPLDPTT QIGADQIEQD LTQLAKISKC VRTYSVDNGL EKLPAIAGKV 

       130        140        150        160        170        180 
GLKVLQGIWL GNERAKNLAQ IAVAVGLAKD YPDVISSLVV GNEVLLRGEM TAGDLAATIR 

       190        200        210        220        230        240 
LVKSQVKTPV TYADVWEYWL RHREIYEAVD FVTIHILPYW EDLPIRARNA AAHVDQIRKR 

       250        260        270        280        290        300 
VAVAFPAKEI LIGETGWPSA GRMREGALPS RTNQARVVSE ILGLAKAENF RVNLIEAYDQ 

       310        320        330        340        350        360 
PWKRDLEGTV GGYWGLIDAD NRALKYPAGV PISNFPQWKL SMAAGMALSL VVFATAMLTL 

       370        380        390        400        410        420 
RRRPWAPRLA AWLAVGVSAT AGGVLLGIAV DKMLVESYGW GRWLQWGLLL ASGVLTPILA 

       430        440        450        460        470        480 
AHALMVGRAV PTFLELFGPL EQRNRSFLTY ALGLSVVVTT LIGAQTALGF TFDPRYRDFP 

       490        500        510        520        530        540 
FASLTMAVLP LFLLMLLNRP QQGARPIAEA VFAGVFAVCA LYIVFNEGPK NWQSLWTCAV 

       550 
YAMLALTLWR ARVVQIPK 

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References

[1]"Complete sequence of Rhodopseudomonas palustris HaA2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. expand/collapse author list , Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HaA2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000250 Genomic DNA. Translation: ABD07560.1.
RefSeqYP_486471.1. NC_007778.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ2IW50.

Protein family/group databases

CAZyGH17. Glycoside Hydrolase Family 17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3910651.
GenomeReviewsGene locus RPB_2858 in contig CP000250_GR.
KEGGrpb:RPB_2858.
PATRIC23300459. VBIRhoPal125544_3011.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5309.
HOGENOMHBG336726.
OMAVWEYWLR.
ProtClustDBCLSK911239.

Enzyme and pathway databases

BioCycRPAL316058:RPB_2858-MONOMER.

Family and domain databases

InterProIPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2IW50_RHOP2
AccessionPrimary (citable) accession number: Q2IW50
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)