Q2IVM9 (Q2IVM9_RHOP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agarase EMBL ABD07731.1
EC=3.2.1.81 EMBL ABD07731.1

Gene names

Ordered Locus Names:

RPB_3029

Organism

Rhodopseudomonas palustris (strain HaA2) [Complete proteome] [HAMAP] EMBL ABD07731.1

Taxonomic identifier

316058 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	451 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD07731.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2IVM9 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 36D7EB6B11359C49	FASTA	451	49,551
	10 20 30 40 50 60 MTDIPRTRWG GLAEDKAAAT GFFRVAQIDG VWWFIDPDGG RFLSKGVTAV NFDHDSIKGT 70 80 90 100 110 120 ERHPYREASL HKYGSRNAWR SAVADRLHRW GFNTIGAWSE PEVASAGCAP LASAAGVVYL 130 140 150 160 170 180 ATAYSDGRGW PQSDPFAPAF ETFAQQRARE ICAPRRDDPS VLGWFIDNEL QWGPDWRGEN 190 200 210 220 230 240 ELLPVILRDN AAPHSRQVAV DLLRRRYASV AEFNTAWRCS ASSWDALATV PIAAPPFTRN 250 260 270 280 290 300 FFTHDHAQER DPLRGRYFAD CDAFAGLLAE RYMAVSAAAI RAAAPHHLVL GSRFAYAPQP 310 320 330 340 350 360 QVIAAAGRHC DVISINCYDA LPDAVIDAYA ECGRPCLIGE FSFRGDDAGL PNTQGAGPRV 370 380 390 400 410 420 ETQADRAAGF ARYVGAGLRH PNLIGYHWFL HADQPAEGRW DGENSNYGVV TIDDEVYVEL 430 440 450 TEAMTVVNDD AEWLHAGAAQ VRRHIATPSA A

References

[1]

"Complete sequence of Rhodopseudomonas palustris HaA2." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A. , Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HaA2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000250 Genomic DNA. Translation: ABD07731.1.
RefSeq	YP_486642.1. NC_007778.1.
3D structure databases
ProteinModelPortal	Q2IVM9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2IVM9.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3910828.
GenomeReviews	Gene locus RPB_3029 in contig CP000250_GR.
KEGG	rpb:RPB_3029.
PATRIC	23300827. VBIRhoPal125544_3189.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG660148.
OMA	RFLSKGV.
ProtClustDB	CLSK819549.
Enzyme and pathway databases
BioCyc	RPAL316058:RPB_3029-MONOMER.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2IVM9_RHOP2

Accession

Primary (citable) accession number: Q2IVM9

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)