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Q2IPD0 (Q2IPD0_ANADE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length726 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABC80659.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2IPD0 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 064ABFD0DA2400BE

FASTA72677,360
        10         20         30         40         50         60 
MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR SWAVPKGPSA 

        70         80         90        100        110        120 
DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR GAWWPVGDPE DGLARGKLVF 

       130        140        150        160        170        180 
RLRGHKLHGE WTLVRTRAAE GGKREWLLLK HRGDPFAGPG RPFPEASVLS GRTVEELAAG 

       190        200        210        220        230        240 
TSRAEAAARE AARLGAPERP LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG 

       250        260        270        280        290        300 
MGAVLRTPGG EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG 

       310        320        330        340        350        360 
AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF AGHVERAGRA 

       370        380        390        400        410        420 
LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA PRRPPPGVRS RPPAAPRSRG 

       430        440        450        460        470        480 
PERSVNVTHP EKVCFPEDGI TRGDLLAYHR AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL 

       490        500        510        520        530        540 
QEDAPAWRPS WLRAVPVHAE GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP 

       550        560        570        580        590        600 
DWCVVELDAA GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA 

       610        620        630        640        650        660 
RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT VLPRPGAPVS 

       670        680        690        700        710        720 
TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE RPDLLRALAR LRARPGAAGR 


RAARRP 

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References

[1]"Complete sequence of Anaeromyxobacter dehalogenans 2CP-C."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Anderson I., Sanford R.A., Ritalahti K.M., Thomas H.S., Kirby J.R., Zhulin I.B., Loeffler F.E., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2CP-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000251 Genomic DNA. Translation: ABC80659.1.
RefSeqYP_464096.1. NC_007760.1.

3D structure databases

ProteinModelPortalQ2IPD0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290397.Adeh_0884.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC80659; ABC80659; Adeh_0884.
GeneID3886622.
KEGGade:Adeh_0884.
PATRIC20917829. VBIAnaDeh31384_0914.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAMAIEVED.
OrthoDBEOG661H49.
ProtClustDBCLSK720152.

Enzyme and pathway databases

BioCycADEH290397:GI2Z-891-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2IPD0_ANADE
AccessionPrimary (citable) accession number: Q2IPD0
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)