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Q2IPD0

- Q2IPD0_ANADE

UniProt

Q2IPD0 - Q2IPD0_ANADE

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Adeh_0884

Organism
Anaeromyxobacter dehalogenans (strain 2CP-C)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciADEH290397:GI2Z-891-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Adeh_0884Imported
OrganismiAnaeromyxobacter dehalogenans (strain 2CP-C)Imported
Taxonomic identifieri290397 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
ProteomesiUP000001935: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290397.Adeh_0884.

Structurei

3D structure databases

ProteinModelPortaliQ2IPD0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiMAIEVED.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2IPD0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR
60 70 80 90 100
SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR
110 120 130 140 150
GAWWPVGDPE DGLARGKLVF RLRGHKLHGE WTLVRTRAAE GGKREWLLLK
160 170 180 190 200
HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE AARLGAPERP
210 220 230 240 250
LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG MGAVLRTPGG
260 270 280 290 300
EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG
310 320 330 340 350
AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF
360 370 380 390 400
AGHVERAGRA LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA
410 420 430 440 450
PRRPPPGVRS RPPAAPRSRG PERSVNVTHP EKVCFPEDGI TRGDLLAYHR
460 470 480 490 500
AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL QEDAPAWRPS WLRAVPVHAE
510 520 530 540 550
GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP DWCVVELDAA
560 570 580 590 600
GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA
610 620 630 640 650
RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT
660 670 680 690 700
VLPRPGAPVS TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE
710 720
RPDLLRALAR LRARPGAAGR RAARRP
Length:726
Mass (Da):77,360
Last modified:March 7, 2006 - v1
Checksum:i064ABFD0DA2400BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000251 Genomic DNA. Translation: ABC80659.1.
RefSeqiYP_464096.1. NC_007760.1.

Genome annotation databases

EnsemblBacteriaiABC80659; ABC80659; Adeh_0884.
GeneIDi3886622.
KEGGiade:Adeh_0884.
PATRICi20917829. VBIAnaDeh31384_0914.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000251 Genomic DNA. Translation: ABC80659.1 .
RefSeqi YP_464096.1. NC_007760.1.

3D structure databases

ProteinModelPortali Q2IPD0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 290397.Adeh_0884.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC80659 ; ABC80659 ; Adeh_0884 .
GeneIDi 3886622.
KEGGi ade:Adeh_0884.
PATRICi 20917829. VBIAnaDeh31384_0914.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi MAIEVED.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci ADEH290397:GI2Z-891-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2CP-CImported.

Entry informationi

Entry nameiQ2IPD0_ANADE
AccessioniPrimary (citable) accession number: Q2IPD0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: October 29, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3