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Q2IPD0

- Q2IPD0_ANADE

UniProt

Q2IPD0 - Q2IPD0_ANADE

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Adeh_0884

Organism
Anaeromyxobacter dehalogenans (strain 2CP-C)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciADEH290397:GI2Z-891-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Adeh_0884Imported
    OrganismiAnaeromyxobacter dehalogenans (strain 2CP-C)Imported
    Taxonomic identifieri290397 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
    ProteomesiUP000001935: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi290397.Adeh_0884.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2IPD0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiMAIEVED.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2IPD0-1 [UniParc]FASTAAdd to Basket

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    MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR    50
    SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR 100
    GAWWPVGDPE DGLARGKLVF RLRGHKLHGE WTLVRTRAAE GGKREWLLLK 150
    HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE AARLGAPERP 200
    LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG MGAVLRTPGG 250
    EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG 300
    AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF 350
    AGHVERAGRA LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA 400
    PRRPPPGVRS RPPAAPRSRG PERSVNVTHP EKVCFPEDGI TRGDLLAYHR 450
    AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL QEDAPAWRPS WLRAVPVHAE 500
    GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP DWCVVELDAA 550
    GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA 600
    RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT 650
    VLPRPGAPVS TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE 700
    RPDLLRALAR LRARPGAAGR RAARRP 726
    Length:726
    Mass (Da):77,360
    Last modified:March 7, 2006 - v1
    Checksum:i064ABFD0DA2400BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000251 Genomic DNA. Translation: ABC80659.1.
    RefSeqiWP_011419942.1. NC_007760.1.
    YP_464096.1. NC_007760.1.

    Genome annotation databases

    EnsemblBacteriaiABC80659; ABC80659; Adeh_0884.
    GeneIDi3886622.
    KEGGiade:Adeh_0884.
    PATRICi20917829. VBIAnaDeh31384_0914.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000251 Genomic DNA. Translation: ABC80659.1 .
    RefSeqi WP_011419942.1. NC_007760.1.
    YP_464096.1. NC_007760.1.

    3D structure databases

    ProteinModelPortali Q2IPD0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 290397.Adeh_0884.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC80659 ; ABC80659 ; Adeh_0884 .
    GeneIDi 3886622.
    KEGGi ade:Adeh_0884.
    PATRICi 20917829. VBIAnaDeh31384_0914.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi MAIEVED.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ADEH290397:GI2Z-891-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2CP-CImported.

    Entry informationi

    Entry nameiQ2IPD0_ANADE
    AccessioniPrimary (citable) accession number: Q2IPD0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 7, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3