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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Adeh_0884

Organism
Anaeromyxobacter dehalogenans (strain 2CP-C)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciADEH290397:GI2Z-891-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Adeh_0884Imported
OrganismiAnaeromyxobacter dehalogenans (strain 2CP-C)Imported
Taxonomic identifieri290397 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
ProteomesiUP000001935 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290397.Adeh_0884.

Structurei

3D structure databases

ProteinModelPortaliQ2IPD0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiMAIEVED.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2IPD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR
60 70 80 90 100
SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR
110 120 130 140 150
GAWWPVGDPE DGLARGKLVF RLRGHKLHGE WTLVRTRAAE GGKREWLLLK
160 170 180 190 200
HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE AARLGAPERP
210 220 230 240 250
LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG MGAVLRTPGG
260 270 280 290 300
EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG
310 320 330 340 350
AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF
360 370 380 390 400
AGHVERAGRA LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA
410 420 430 440 450
PRRPPPGVRS RPPAAPRSRG PERSVNVTHP EKVCFPEDGI TRGDLLAYHR
460 470 480 490 500
AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL QEDAPAWRPS WLRAVPVHAE
510 520 530 540 550
GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP DWCVVELDAA
560 570 580 590 600
GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA
610 620 630 640 650
RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT
660 670 680 690 700
VLPRPGAPVS TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE
710 720
RPDLLRALAR LRARPGAAGR RAARRP
Length:726
Mass (Da):77,360
Last modified:March 7, 2006 - v1
Checksum:i064ABFD0DA2400BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000251 Genomic DNA. Translation: ABC80659.1.
RefSeqiWP_011419942.1. NC_007760.1.
YP_464096.1. NC_007760.1.

Genome annotation databases

EnsemblBacteriaiABC80659; ABC80659; Adeh_0884.
KEGGiade:Adeh_0884.
PATRICi20917829. VBIAnaDeh31384_0914.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000251 Genomic DNA. Translation: ABC80659.1.
RefSeqiWP_011419942.1. NC_007760.1.
YP_464096.1. NC_007760.1.

3D structure databases

ProteinModelPortaliQ2IPD0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290397.Adeh_0884.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC80659; ABC80659; Adeh_0884.
KEGGiade:Adeh_0884.
PATRICi20917829. VBIAnaDeh31384_0914.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiMAIEVED.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciADEH290397:GI2Z-891-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2CP-CImported.

Entry informationi

Entry nameiQ2IPD0_ANADE
AccessioniPrimary (citable) accession number: Q2IPD0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 27, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.