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Q2IFX2 (Q2IFX2_ANADE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Adeh_3718 EMBL ABC83484.1
OrganismAnaeromyxobacter dehalogenans (strain 2CP-C) [Complete proteome] [HAMAP] EMBL ABC83484.1
Taxonomic identifier290397 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeAnaeromyxobacter

Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Keywords
   DomainSignal EMBL ABC83484.1
   Technical term3D-structure PDB 4K08
Complete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3636 Potential EMBL ABC83484.1
Chain37 – 526490 Potential EMBL ABC83484.1
PRO_5000108624

Regions

Region94 – 963Acetate binding PDB 4K08
Region147 – 1493Acetate binding PDB 4K08

Sites

Binding site1071Acetate PDB 4K08
Binding site1601Acetate PDB 4K08

Sequences

Sequence LengthMass (Da)Tools
Q2IFX2 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 46F5717823A14317

FASTA52654,835
        10         20         30         40         50         60 
MLHALANLSI STRLRLVLFA GAAGLFLLSW QSVRVLEARM LAERQAKVRA LVEAAHGLVE 

        70         80         90        100        110        120 
HQGARAARGE ISADEARRAA LEALRALRYD GSEYFWVNDL EPRMVMHPTN PQLDGQDLSG 

       130        140        150        160        170        180 
YRDPNGKLLF QEFVRTVRAR GSGFVDYLWP KPGSTVPVPK ISFVTQYQPW GWVVGSGLYV 

       190        200        210        220        230        240 
DDLDAAVRQE ALRVLGTGAL IVAVILGGAA LVARGVRRSL ARAVRAAGAV ASGDLTVRIP 

       250        260        270        280        290        300 
DAARDEPGRV LDALSGMADR LSAVVGEVRG ASEAIASAAE ETRTVAGALA EASSGQASDV 

       310        320        330        340        350        360 
ARSSEAVREL VTEIDGAAAE ARATDQLARR AAGDAGEGAQ AVRETALAMR AIAEKIGVVG 

       370        380        390        400        410        420 
EIAYQTNLLA LNSAIEAARA GVHGRGFAVV ATEVRRLAER SRVAAQEIGE LAGGSVAAAD 

       430        440        450        460        470        480 
RAAELIARAL PSIGATSERV QRITEAAGRQ HQAARAIGEV LHGLAGASER QAAASEELAG 

       490        500        510        520 
SAAALSDNAE ELARTVGWFR VPGGSGEIAP APACVEPPRP AGRQAA 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Anaeromyxobacter dehalogenans 2CP-C."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Anderson I., Sanford R.A., Ritalahti K.M., Thomas H.S., Kirby J.R., Zhulin I.B., Loeffler F.E., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2CP-C.
[2]"Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: Structures of one helical bundle sensor and one PAS-like sensor."
Pokkuluri P.R., Dwulit-Smith J., Duke N.E., Wilton R., Mack J.C., Bearden J., Rakowski E., Babnigg G., Szurmant H., Joachimiak A., Schiffer M.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 38-190 IN COMPLEX WITH ACETATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000251 Genomic DNA. Translation: ABC83484.1.
RefSeqYP_466921.1. NC_007760.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4K08X-ray2.00A38-190[»]
ProteinModelPortalQ2IFX2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290397.Adeh_3718.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC83484; ABC83484; Adeh_3718.
GeneID3886415.
KEGGade:Adeh_3718.
PATRIC20923683. VBIAnaDeh31384_3798.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMANDLEPRM.
OrthoDBEOG6CK7NC.

Enzyme and pathway databases

BioCycADEH290397:GI2Z-3773-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2IFX2_ANADE
AccessionPrimary (citable) accession number: Q2IFX2
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: June 11, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)