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Q2GLJ4

- DCD_ANAPZ

UniProt

Q2GLJ4 - DCD_ANAPZ

Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Anaplasma phagocytophilum (strain HZ)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (21 Mar 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dCTP + H2O = dUTP + NH3.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. dCTP deaminase activity Source: TIGR

    GO - Biological processi

    1. dCTP catabolic process Source: TIGR
    2. dUMP biosynthetic process Source: UniProtKB-UniPathway
    3. dUTP biosynthetic process Source: InterPro
    4. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Nucleotide metabolism

    Enzyme and pathway databases

    BioCyciAPHA212042:GHPM-130-MONOMER.
    UniPathwayiUPA00610; UER00665.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
    Short name:
    dCTP deaminaseUniRule annotation
    Gene namesi
    Name:dcdUniRule annotation
    Ordered Locus Names:APH_0130
    OrganismiAnaplasma phagocytophilum (strain HZ)
    Taxonomic identifieri212042 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeAnaplasmaphagocytophilum group
    ProteomesiUP000001943: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 185185Deoxycytidine triphosphate deaminasePRO_1000009677Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi212042.APH_0130.

    Structurei

    Secondary structure

    1
    185
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi6 – 1611
    Beta strandi19 – 213
    Beta strandi27 – 326
    Beta strandi34 – 374
    Beta strandi40 – 5213
    Helixi67 – 693
    Beta strandi70 – 8011
    Beta strandi84 – 9512
    Beta strandi100 – 1056
    Helixi108 – 1114
    Turni112 – 1143
    Beta strandi115 – 1173
    Beta strandi127 – 13610
    Beta strandi138 – 1403
    Beta strandi142 – 1454
    Beta strandi148 – 15710

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3KM3X-ray2.10A/B1-185[»]
    ProteinModelPortaliQ2GLJ4.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ2GLJ4.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the dCTP deaminase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0717.
    HOGENOMiHOG000228600.
    KOiK01494.
    OMAiMPDHWIK.
    OrthoDBiEOG67DPKR.

    Family and domain databases

    Gene3Di2.70.40.10. 1 hit.
    HAMAPiMF_00146. dCTP_deaminase.
    InterProiIPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    [Graphical view]
    SUPFAMiSSF51283. SSF51283. 1 hit.
    TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2GLJ4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVMPDHWIK ERALKDGMIS PFVDHKEGTG VLSYGLSSYG YDARLDNKFK    50
    IFANTHSVVV DPKNFSQDSF VDREGDFCII PPNSFMLAKT VEYFNIPRDV 100
    MVVCVGKSTY ARCGIVVNVT PLEPGWSGYV TLEFSNTSPL PVKVYAFEGA 150
    CQFLFFSGKE RCSKSYDEAG GKYMGQSDVT LPIIS 185
    Length:185
    Mass (Da):20,591
    Last modified:March 21, 2006 - v1
    Checksum:iCEB4032A48EEE38F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000235 Genomic DNA. Translation: ABD43468.1.
    RefSeqiYP_504757.1. NC_007797.1.

    Genome annotation databases

    EnsemblBacteriaiABD43468; ABD43468; APH_0130.
    GeneIDi3930370.
    KEGGiaph:APH_0130.
    PATRICi20948828. VBIAnaPha602_0139.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000235 Genomic DNA. Translation: ABD43468.1 .
    RefSeqi YP_504757.1. NC_007797.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3KM3 X-ray 2.10 A/B 1-185 [» ]
    ProteinModelPortali Q2GLJ4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 212042.APH_0130.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD43468 ; ABD43468 ; APH_0130 .
    GeneIDi 3930370.
    KEGGi aph:APH_0130.
    PATRICi 20948828. VBIAnaPha602_0139.

    Phylogenomic databases

    eggNOGi COG0717.
    HOGENOMi HOG000228600.
    KOi K01494.
    OMAi MPDHWIK.
    OrthoDBi EOG67DPKR.

    Enzyme and pathway databases

    UniPathwayi UPA00610 ; UER00665 .
    BioCyci APHA212042:GHPM-130-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q2GLJ4.

    Family and domain databases

    Gene3Di 2.70.40.10. 1 hit.
    HAMAPi MF_00146. dCTP_deaminase.
    InterProi IPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    [Graphical view ]
    SUPFAMi SSF51283. SSF51283. 1 hit.
    TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HZ.

    Entry informationi

    Entry nameiDCD_ANAPZ
    AccessioniPrimary (citable) accession number: Q2GLJ4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: March 21, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3