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Q2GKX4

- Q2GKX4_ANAPZ

UniProt

Q2GKX4 - Q2GKX4_ANAPZ

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Protein

Superoxide dismutase

Gene

sodB

Organism
Anaplasma phagocytophilum (strain HZ)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241Iron; via tele nitrogenImported
Metal bindingi80 – 801Iron; via tele nitrogenImported
Metal bindingi165 – 1651IronImported
Metal bindingi169 – 1691Iron; via tele nitrogenImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

IronImported, Metal-bindingImported

Enzyme and pathway databases

BioCyciAPHA212042:GHPM-370-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:APH_0371Imported
OrganismiAnaplasma phagocytophilum (strain HZ)Imported
Taxonomic identifieri212042 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeAnaplasmaphagocytophilum group
ProteomesiUP000001943: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi212042.APH_0371.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JS4X-ray1.95A/B/C/D1-206[»]
ProteinModelPortaliQ2GKX4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2GKX4.

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013584.
KOiK04564.
OMAiWTWLVKG.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2GKX4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFELSDLPYE GLEPYISSHL LDRHYNGHHK TYVDVLNKLV VGTEFEGLGN
60 70 80 90 100
ESLGDIVVKA HNSGSAGRAI FNNAAQIWNH DFYWQSMKPN GGGNPPEKLR
110 120 130 140 150
EMIEHSFGSV EGFNNAFTTS GLGQFGSGWV WLVYDEDAKA LKVVSTANAD
160 170 180 190 200
SPLLTQGQLP LATMDVWEHA YYLDYLNLRK KYIDVFLEHL LNWDFVLGRL

EDAGVL
Length:206
Mass (Da):23,167
Last modified:March 21, 2006 - v1
Checksum:iA7C3846EED519C5B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000235 Genomic DNA. Translation: ABD43382.1.
RefSeqiYP_504977.1. NC_007797.1.

Genome annotation databases

EnsemblBacteriaiABD43382; ABD43382; APH_0371.
GeneIDi3929965.
KEGGiaph:APH_0371.
PATRICi20949348. VBIAnaPha602_0394.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000235 Genomic DNA. Translation: ABD43382.1 .
RefSeqi YP_504977.1. NC_007797.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3JS4 X-ray 1.95 A/B/C/D 1-206 [» ]
ProteinModelPortali Q2GKX4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 212042.APH_0371.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD43382 ; ABD43382 ; APH_0371 .
GeneIDi 3929965.
KEGGi aph:APH_0371.
PATRICi 20949348. VBIAnaPha602_0394.

Phylogenomic databases

eggNOGi COG0605.
HOGENOMi HOG000013584.
KOi K04564.
OMAi WTWLVKG.
OrthoDBi EOG63NMNT.

Enzyme and pathway databases

BioCyci APHA212042:GHPM-370-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q2GKX4.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HZImported.
  2. "Crystal structure of Iron superoxide dismutase from Anaplasma phagocytophilum."
    Seattle Structural Genomics Center for Infectious Disease (SSGCID)
    Edwards T.E., Staker B.L.
    Submitted (SEP-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.95 ANGSTROMS) IN COMPLEX WITH IRON.

Entry informationi

Entry nameiQ2GKX4_ANAPZ
AccessioniPrimary (citable) accession number: Q2GKX4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: October 29, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3