Reviewed, UniProtKB/Swiss-Prot Q2GKK3 (PYRB_ANAPZ)

Names and origin

Protein names

Recommended name:
    Aspartate carbamoyltransferase
    EC=2.1.3.2
Alternative name(s):
    Aspartate transcarbamylase
      Short name=ATCase

Gene names

Name:	pyrB
Ordered Locus Names:	APH_0503

Organism

Anaplasma phagocytophilum (strain HZ) [Complete proteome] [HAMAP]

Taxonomic identifier

212042 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Anaplasmataceae › Anaplasma › phagocytophilum group

Protein attributes

Sequence length	300 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate. HAMAP MF_00001
Pathway	Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3. HAMAP MF_00001
Sequence similarities	Belongs to the ATCase/OTCase family.

Ontologies

Keywords
Biological process	Pyrimidine biosynthesis
Molecular function	Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	'de novo' pyrimidine base biosynthetic process Inferred from electronic annotation. Source: InterPro cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro pyrimidine nucleotide biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	amino acid binding Inferred from electronic annotation. Source: InterPro aspartate carbamoyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 300	300	Aspartate carbamoyltransferase HAMAP MF_00001		PRO_0000301550

Sequences

	Sequence		Length	Mass (Da)
	Q2GKK3-1 [UniParc]. Last modified March 21, 2006. Version 1. Checksum: 6C5CF10F6B738A66	FASTA	300	32,821
	10 20 30 40 50 60 MKKLNKLLRI QSLSDVDIEN IVALAHRYLQ DSSANNVLQG RVIANLFFEN STRTLLAFEI 70 80 90 100 110 120 AEKSLGAVSV TLNVETSSMK KGESVSDTLS TLSAMGVDLV VVRSGFSGFI DEVVERVGDC 130 140 150 160 170 180 CVINAGDGNH EHPTQALTDY ATIRYLKGKY IEGLNVTICG DIFHSRVARS NMRLLSRYGA 190 200 210 220 230 240 NINVVTPPCW SASVPSSNVT KITHSLEEGI KDADVIMLLR IQKERMSGAS FISANEYSRH 250 260 270 280 290 300 YMLDNAKLSI AKDDVIIMHP GPMNRGIEIS DEVADASSSI LLQVKMGVAV RKAILHYMLG

References

[1]

"Comparative genomics of emerging human ehrlichiosis agents." Dunning Hotopp J.C., Lin M., Madupu R., Crabtree J., Angiuoli S.V., Eisen J.A., Seshadri R., Ren Q., Wu M., Utterback T.R., Smith S., Lewis M., Khouri H., Zhang C., Niu H., Lin Q., Ohashi N., Zhi N. , Nelson W.C., Brinkac L.M., Dodson R.J., Rosovitz M.J., Sundaram J.P., Daugherty S.C., Davidsen T., Durkin A.S., Gwinn M.L., Haft D.H., Selengut J.D., Sullivan S.A., Zafar N., Zhou L., Benahmed F., Forberger H., Halpin R., Mulligan S., Robinson J., White O., Rikihisa Y., Tettelin H. PLoS Genet. 2:208-222(2006) [PubMed: 16482227] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000235 Genomic DNA. Translation: ABD43862.1.
RefSeq	YP_505098.1.
3D structure databases
SMR	Q2GKK3. Positions 6-300.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2GKK3.
Genome annotation databases
GeneID	3930392.
GenomeReviews	Gene locus APH_0503 in contig CP000235_GR.
KEGG	aph:APH_0503.
NMPDR	fig|212042.5.peg.497.
TIGR	APH_0503.
Phylogenomic databases
eggNOG	COG0540.
HOGENOM	HBG579429.
OMA	VMMLRVQ.
Enzyme and pathway databases
BioCyc	APHA212042:APH_0503-MONOMER.
Family and domain databases
HAMAP	MF_00001. Asp_carb_tr. [Tree]
InterPro	IPR006132. Asp/Orn_carbamoyltranf_P_bd. IPR006130. Asp/Orn_carbamoylTrfase. IPR006131. Asp_carbamoyltransf_Asp/Orn_bd. IPR002082. Asp_carbamoyltransf_euk. [Graphical view]
Pfam	PF00185. OTCace. 1 hit. PF02729. OTCace_N. 1 hit. [Graphical view]
PRINTS	PR00100. AOTCASE. PR00101. ATCASE.
TIGRFAMs	TIGR00670. asp_carb_tr. 1 hit.
PROSITE	PS00097. CARBAMOYLTRANSFERASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

PYRB_ANAPZ

Accession

Primary (citable) accession number: Q2GKK3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	March 21, 2006
Last modified:	February 9, 2010
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)