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Q2GH49

- RL16_EHRCR

UniProt

Q2GH49 - RL16_EHRCR

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Protein

50S ribosomal protein L16

Gene

rplP

Organism
Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-KW

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciECHA205920:GJNR-417-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L16UniRule annotation
Gene namesi
Name:rplPUniRule annotation
Ordered Locus Names:ECH_0416
OrganismiEhrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)
Taxonomic identifieri205920 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeEhrlichia
ProteomesiUP000008320: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13613650S ribosomal protein L16PRO_0000251632Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi205920.ECH_0416.

Structurei

3D structure databases

ProteinModelPortaliQ2GH49.
SMRiQ2GH49. Positions 1-135.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L16P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0197.
HOGENOMiHOG000164573.
KOiK02878.
OMAiTFVSRMI.
OrthoDBiEOG6WHNWS.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
HAMAPiMF_01342. Ribosomal_L16.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
PROSITEiPS00701. RIBOSOMAL_L16_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2GH49-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFIPKKTKYK KDFKGRISGN AKGGYTLSFG SHGLKALEPS RLTSKQIESA
60 70 80 90 100
RRSISRTLKR VGKVWIRAFC HTSVSKKPMD VRMGKGKGSV EMWVCKVKPG
110 120 130
KILFEIGGVP LNLAREALNK AQAKLPMKCK FVSDEL
Length:136
Mass (Da):15,156
Last modified:March 21, 2006 - v1
Checksum:i6FCA1CABF6951E67
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000236 Genomic DNA. Translation: ABD44939.1.
RefSeqiWP_011452583.1. NC_007799.1.
YP_507234.1. NC_007799.1.

Genome annotation databases

EnsemblBacteriaiABD44939; ABD44939; ECH_0416.
GeneIDi3927602.
KEGGiech:ECH_0416.
PATRICi20576309. VBIEhrCha103583_0353.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000236 Genomic DNA. Translation: ABD44939.1 .
RefSeqi WP_011452583.1. NC_007799.1.
YP_507234.1. NC_007799.1.

3D structure databases

ProteinModelPortali Q2GH49.
SMRi Q2GH49. Positions 1-135.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 205920.ECH_0416.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD44939 ; ABD44939 ; ECH_0416 .
GeneIDi 3927602.
KEGGi ech:ECH_0416.
PATRICi 20576309. VBIEhrCha103583_0353.

Phylogenomic databases

eggNOGi COG0197.
HOGENOMi HOG000164573.
KOi K02878.
OMAi TFVSRMI.
OrthoDBi EOG6WHNWS.

Enzyme and pathway databases

BioCyci ECHA205920:GJNR-417-MONOMER.

Family and domain databases

Gene3Di 3.90.1170.10. 1 hit.
HAMAPi MF_01342. Ribosomal_L16.
InterProi IPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
[Graphical view ]
PANTHERi PTHR12220. PTHR12220. 1 hit.
Pfami PF00252. Ribosomal_L16. 1 hit.
[Graphical view ]
PRINTSi PR00060. RIBOSOMALL16.
SUPFAMi SSF54686. SSF54686. 1 hit.
TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
PROSITEi PS00701. RIBOSOMAL_L16_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC CRL-10679 / Arkansas.

Entry informationi

Entry nameiRL16_EHRCR
AccessioniPrimary (citable) accession number: Q2GH49
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: March 21, 2006
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3