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Q2GH49

- RL16_EHRCR

UniProt

Q2GH49 - RL16_EHRCR

Protein

50S ribosomal protein L16

Gene

rplP

Organism
Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (21 Mar 2006)
      Previous versions | rss
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    Functioni

    Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding, tRNA-binding

    Enzyme and pathway databases

    BioCyciECHA205920:GJNR-417-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L16UniRule annotation
    Gene namesi
    Name:rplPUniRule annotation
    Ordered Locus Names:ECH_0416
    OrganismiEhrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)
    Taxonomic identifieri205920 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeEhrlichia
    ProteomesiUP000008320: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 13613650S ribosomal protein L16PRO_0000251632Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi205920.ECH_0416.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2GH49.
    SMRiQ2GH49. Positions 1-135.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L16P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0197.
    HOGENOMiHOG000164573.
    KOiK02878.
    OMAiTFVSRMI.
    OrthoDBiEOG6WHNWS.

    Family and domain databases

    Gene3Di3.90.1170.10. 1 hit.
    HAMAPiMF_01342. Ribosomal_L16.
    InterProiIPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view]
    PANTHERiPTHR12220. PTHR12220. 1 hit.
    PfamiPF00252. Ribosomal_L16. 1 hit.
    [Graphical view]
    PRINTSiPR00060. RIBOSOMALL16.
    SUPFAMiSSF54686. SSF54686. 1 hit.
    TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
    PROSITEiPS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2GH49-1 [UniParc]FASTAAdd to Basket

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    MFIPKKTKYK KDFKGRISGN AKGGYTLSFG SHGLKALEPS RLTSKQIESA    50
    RRSISRTLKR VGKVWIRAFC HTSVSKKPMD VRMGKGKGSV EMWVCKVKPG 100
    KILFEIGGVP LNLAREALNK AQAKLPMKCK FVSDEL 136
    Length:136
    Mass (Da):15,156
    Last modified:March 21, 2006 - v1
    Checksum:i6FCA1CABF6951E67
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000236 Genomic DNA. Translation: ABD44939.1.
    RefSeqiYP_507234.1. NC_007799.1.

    Genome annotation databases

    EnsemblBacteriaiABD44939; ABD44939; ECH_0416.
    GeneIDi3927602.
    KEGGiech:ECH_0416.
    PATRICi20576309. VBIEhrCha103583_0353.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000236 Genomic DNA. Translation: ABD44939.1 .
    RefSeqi YP_507234.1. NC_007799.1.

    3D structure databases

    ProteinModelPortali Q2GH49.
    SMRi Q2GH49. Positions 1-135.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 205920.ECH_0416.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD44939 ; ABD44939 ; ECH_0416 .
    GeneIDi 3927602.
    KEGGi ech:ECH_0416.
    PATRICi 20576309. VBIEhrCha103583_0353.

    Phylogenomic databases

    eggNOGi COG0197.
    HOGENOMi HOG000164573.
    KOi K02878.
    OMAi TFVSRMI.
    OrthoDBi EOG6WHNWS.

    Enzyme and pathway databases

    BioCyci ECHA205920:GJNR-417-MONOMER.

    Family and domain databases

    Gene3Di 3.90.1170.10. 1 hit.
    HAMAPi MF_01342. Ribosomal_L16.
    InterProi IPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view ]
    PANTHERi PTHR12220. PTHR12220. 1 hit.
    Pfami PF00252. Ribosomal_L16. 1 hit.
    [Graphical view ]
    PRINTSi PR00060. RIBOSOMALL16.
    SUPFAMi SSF54686. SSF54686. 1 hit.
    TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
    PROSITEi PS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC CRL-10679 / Arkansas.

    Entry informationi

    Entry nameiRL16_EHRCR
    AccessioniPrimary (citable) accession number: Q2GH49
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 3, 2006
    Last sequence update: March 21, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3