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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 component

Gene

sucA

Organism
Neorickettsia sennetsu (strain Miyayama)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciNSEN222891:GHFU-580-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:NSE_0578Imported
OrganismiNeorickettsia sennetsu (strain Miyayama)Imported
Taxonomic identifieri222891 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeNeorickettsia
ProteomesiUP000001942 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi222891.NSE_0578.

Structurei

3D structure databases

ProteinModelPortaliQ2GDI7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiNFTQPLM.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2GDI7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKGTRMKVAD DELLKKVHRA YLDSPNSVDP SWRAFFESRG CVKRSGGQSG
60 70 80 90 100
FSNMSFVRKD NGAVRENAVS EQSLLDIKIK DLKDAYRRFG YLAADLDLLG
110 120 130 140 150
LVKPIVRPEL NPEFHGLSDV SLSSGFTVEQ IVCEMHAVYC GHIGVQFMHL
160 170 180 190 200
SDNSEVTWLE ERLEGRPFCR IGFGTSHKLA LLDVLIRVNG LEEFVNTKFR
210 220 230 240 250
AVKRFSVEGC DTALVALESI IEVAANAGCT DVIVGMSHRG RLNSLVNTFG
260 270 280 290 300
KKYRALFHGF EGKSPFPEEC KIHGDVKYHY GFSCERKTFL SEKTIFARLL
310 320 330 340 350
HNPSHLDSVD PVLVGAARAA KDSGAVVFPV LLHGDAAFSG QGVVYETMLL
360 370 380 390 400
EELPNYESGG VIHIILNNQI GFTTSPQDVR KQRYPSFIGE SFDIPIFHVN
410 420 430 440 450
GDDPEAVFYV TLLAAEFRNT FNKSAIVDIV SYRRHGHNEI DEPRFTQPEM
460 470 480 490 500
YDVIERHKRS VDIYVERLIK EGVISQDKFV ELTQNFGGLL DKELKEAKTY
510 520 530 540 550
KPSYEGLIQK GWERYLGQEG RDEPQVETKV PKEVLLSLSE KLNHIPEGFD
560 570 580 590 600
VSPKVLRLLV RREETIVSEC DVDWGNGENL AFATILNDGM SVRLAGQDCK
610 620 630 640 650
RGTFSHRHAV LTSQSTGEEL CLLNHISDVA KMQVIATPLS EYAALGFEYG
660 670 680 690 700
YSLINPKTLV LWEAQFGDFA NGAQIIIDQF ISSAESKWLS RSGLVMLLPH
710 720 730 740 750
GYEGQGAEHS SARIERFLQL AADNNMRVAN CTTPANFFHV LRRQVLSEIV
760 770 780 790 800
RPLVVFTPKS LLRHKMAVSK LEEFYEGSFR PVISDYCSDA KKIHRVIFCS
810 820 830 840 850
GKVYYDLLAE LKSESILLVR VEQLYPVPDR EIREILDVYR DAEFIWCQEE
860 870 880 890 900
PRNMGGWSFM LQVFEERYSK KLRYIGRNYY PVPSEGLMDD HIANQAALIK

QAITV
Length:905
Mass (Da):102,254
Last modified:March 21, 2006 - v1
Checksum:iC1839DBF6C9D1572
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000237 Genomic DNA. Translation: ABD46269.1.
RefSeqiWP_011451965.1. NC_007798.1.
YP_506459.1. NC_007798.1.

Genome annotation databases

EnsemblBacteriaiABD46269; ABD46269; NSE_0578.
KEGGinse:NSE_0578.
PATRICi22681195. VBINeoSen119815_0521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000237 Genomic DNA. Translation: ABD46269.1.
RefSeqiWP_011451965.1. NC_007798.1.
YP_506459.1. NC_007798.1.

3D structure databases

ProteinModelPortaliQ2GDI7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi222891.NSE_0578.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD46269; ABD46269; NSE_0578.
KEGGinse:NSE_0578.
PATRICi22681195. VBINeoSen119815_0521.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiNFTQPLM.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciNSEN222891:GHFU-580-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MiyayamaImported.

Entry informationi

Entry nameiQ2GDI7_NEOSM
AccessioniPrimary (citable) accession number: Q2GDI7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: April 1, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.