Q2GC30 (Q2GC30_NOVAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 25 EMBL ABD24593.1

Gene names

Ordered Locus Names:

Saro_0144

Organism

Novosphingobium aromaticivorans (strain DSM 12444) [Complete proteome] [HAMAP]

Taxonomic identifier

279238 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Novosphingobium

Protein attributes

Sequence length	231 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABD24593.1
Molecular function	Hydrolase EMBL ABD24593.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 27	27	Potential EMBL ABD24593.1
	Chain	28 – 231	204	Potential EMBL ABD24593.1		PRO_5000105922

Sequences

	Sequence		Length	Mass (Da)
	Q2GC30 [UniParc]. Last modified March 21, 2006. Version 1. Checksum: ECFCFCB8B2E47E0C	FASTA	231	25,558
	10 20 30 40 50 60 MAKKRNTVRR RLLAALLLVV LVGAGAGWWT SRTWMPDRTR YPVQGVWLSD DDGSVDWRFL 70 80 90 100 110 120 RAAGADFAYL TASEGAGTRD SVYAAGVEAA RLRGLQVGPV HVYDLCAPAD AQAANFVTVV 130 140 150 160 170 180 PRDPELLPPA IALDIDSRTC PEPPGEAQMQ SELTTFLNQV EKHAEKPAIL MVSRGLEKQY 190 200 210 220 230 HLAAMIDRNL WVSQDFIEPG YAGRPWVMWT ATKRLRLHGA SGPLRWVVVQ P

References

[1]

"Complete sequence of Novosphingobium aromaticivorans DSM 12444." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N. , Fredrickson J., Balkwill D., Romine M.F., Richardson P. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12444.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000248 Genomic DNA. Translation: ABD24593.1.
RefSeq	YP_495427.1. NC_007794.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q2GC30.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3918118.
GenomeReviews	Gene locus Saro_0144 in contig CP000248_GR.
KEGG	nar:Saro_0144.
NMPDR	fig|48935.1.peg.3618.
PATRIC	22782866. VBINovAro50627_0150.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	FFTFCRP.
ProtClustDB	CLSK753615.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2GC30_NOVAD

Accession

Primary (citable) accession number: Q2GC30

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2006
Last sequence update:	March 21, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)