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Q2GA79 (Q2GA79_NOVAD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length351 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region265 – 2684Chloride 5 binding PDB 4INF

Sites

Metal binding191Calcium PDB 4INF PDB 4ING
Metal binding1881Calcium; via tele nitrogen PDB 4INF PDB 4ING
Metal binding3141Calcium PDB 4INF PDB 4ING
Binding site581Chloride 3; via amide nitrogen PDB 4INF
Binding site1231Chloride 4; via amide nitrogen PDB 4INF
Binding site1411Chloride 2 PDB 4INF
Binding site1691Chloride 5; via amide nitrogen PDB 4INF
Binding site2081Chloride 2; via amide nitrogen PDB 4INF
Binding site2341Chloride 6 PDB 4INF
Binding site2621Chloride 7 PDB 4INF
Binding site2751Chloride 8; via amide nitrogen PDB 4INF

Sequences

Sequence LengthMass (Da)Tools
Q2GA79 [UniParc].

Last modified March 21, 2006. Version 1.
Checksum: F60CF52989252B7F

FASTA35139,852
        10         20         30         40         50         60 
MTQDLKTGGE QGYLRIATEE AFATREIIDV YLRMIRDGTA DKGMVSLWGF YAQSPSERAT 

        70         80         90        100        110        120 
QILERLLDLG ERRIADMDAT GIDKAILALT SPGVQPLHDL DEARTLATRA NDTLADACQK 

       130        140        150        160        170        180 
YPDRFIGMGT VAPQDPEWSA REIHRGAREL GFKGIQINSH TQGRYLDEEF FDPIFRALVE 

       190        200        210        220        230        240 
VDQPLYIHPA TSPDSMIDPM LEAGLDGAIF GFGVETGMHL LRLITIGIFD KYPSLQIMVG 

       250        260        270        280        290        300 
HMGEALPYWL YRLDYMHQAG VRSQRYERMK PLKKTIEGYL KSNVLVTNSG VAWEPAIKFC 

       310        320        330        340        350 
QQVMGEDRVM YAMDYPYQYV ADEVRAMDAM DMSAQTKKKF FQTNAEKWFK L 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Novosphingobium aromaticivorans DSM 12444."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N. expand/collapse author list , Fredrickson J., Balkwill D., Romine M.F., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12444.
[2]"Crystal structure of amidohydrolase sarp_0799 (target efi-505250) from Novosphingobium aromaticivorans."
Patskovsky Y., Toro R., Bhosle R., Hillerich B., Seidel R.D., Washington E., Scott Glenn A., Chowdhury S., Evans B., Hammonds J., Zencheck W.D., Imker H.J., Al Obaidi N.F., Stead M., Love J., Gerlt J.A., Raushel F.M., Almo S.C.
Submitted (JAN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH CALCIUM.
[3]"Crystal structure of amidohydrolase sarp_0799 (target efi-505250) from novosphingobium aromaticivorans."
Patskovsky Y., Toro R., Bhosle R., Hillerich B., Seidel R.D., Washington E., Scott Glenn A., Chowdhury S., Evans B., Hammonds J., Zencheck W.D., Imker H.J., Gerlt J.A., Raushel F.M., Almo S.C.
Submitted (JAN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.48 ANGSTROMS) IN COMPLEX WITH CALCIUM AND CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000248 Genomic DNA. Translation: ABD25244.1.
RefSeqYP_496078.1. NC_007794.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4INFX-ray1.48A/B/C/D1-351[»]
4INGX-ray2.10A/B1-351[»]
ProteinModelPortalQ2GA79.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279238.Saro_0799.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD25244; ABD25244; Saro_0799.
GeneID3915853.
KEGGnar:Saro_0799.
PATRIC22784222. VBINovAro50627_0819.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2159.
HOGENOMHOG000254104.
KOK14333.
OMADQHGIDM.
OrthoDBEOG628F7F.

Enzyme and pathway databases

BioCycNARO279238:GHBU-809-MONOMER.

Family and domain databases

InterProIPR006992. Amidohydro_2.
[Graphical view]
PfamPF04909. Amidohydro_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2GA79_NOVAD
AccessionPrimary (citable) accession number: Q2GA79
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: June 11, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)