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Q2GA26 (Q2GA26_NOVAD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Saro_0852 EMBL ABD25297.1
OrganismNovosphingobium aromaticivorans (strain DSM 12444) [Complete proteome] [HAMAP] EMBL ABD25297.1
Taxonomic identifier279238 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium

Protein attributes

Sequence length593 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD25297.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ABD25297.1
Chain36 – 593558 Potential EMBL ABD25297.1
PRO_5000106062

Sequences

Sequence LengthMass (Da)Tools
Q2GA26 [UniParc].

Last modified March 21, 2006. Version 1.
Checksum: D03173C8FFC2B7A6

FASTA59362,015
        10         20         30         40         50         60 
MAFLGNLKIR TISIAGNLLL GLAAVGGGIA SVVGVGAMKE QVVFIDENTV PSIAQIGDVS 

        70         80         90        100        110        120 
IGVMEARFAM SKLILASTDV ARQEQDGTLN EKKAAVDKML EDYRANISGD EEQKLFDAVL 

       130        140        150        160        170        180 
ASWDDWKATA GPIRQLAMQA QIDEATLKFN DELGPRGAAL AKALDALRDF NVKLGGDASD 

       190        200        210        220        230        240 
AAVAGATSTR SLAMSVAAIS ALIASLVVFL TIVRIARPVA QLTAAMEDMA GGNLDRDVPF 

       250        260        270        280        290        300 
RDQPDEVGGI GRALESIKDS IARRTREEAE QRMEIQQRMV SGLAQGLTAL RDGRLNCRID 

       310        320        330        340        350        360 
QAFPEEYEGL RHDFNQTIES LAALIAQVVQ GSGNVRTGAS EIASAAADLS GRTESQAAAL 

       370        380        390        400        410        420 
EESAAAVRQI TDSLRESAHT ASEASSVAGE ARRDASASGE MMGRAVSAME EIAKSSGRMG 

       430        440        450        460        470        480 
EIVSLIEGIA FQTNLLALNA GVEAARAGDA GKGFAVVASE VRALAQRSAE AASEITGIIK 

       490        500        510        520        530        540 
SSEREVGDGV QVIGQTQEAL DQIVRHTARL SDMIGTIAEA TSQQSAAISQ VNTVVGDMDR 

       550        560        570        580        590 
ITQQNAALVE ESTAASQNLA NAAGTLSQLV ERFDLGDSRG RAPAQAAPRR LAA 

« Hide

References

[1]"Complete sequence of Novosphingobium aromaticivorans DSM 12444."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N. expand/collapse author list , Fredrickson J., Balkwill D., Romine M.F., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12444.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000248 Genomic DNA. Translation: ABD25297.1.
RefSeqYP_496131.1. NC_007794.1.

3D structure databases

ProteinModelPortalQ2GA26.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279238.Saro_0852.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD25297; ABD25297; Saro_0852.
GeneID3915907.
KEGGnar:Saro_0852.
PATRIC22784326. VBINovAro50627_0870.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMASKDRVEY.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycNARO279238:GHBU-863-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2GA26_NOVAD
AccessionPrimary (citable) accession number: Q2GA26
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: February 19, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)