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Protein
Submitted name:

Protein-disulfide isomerase

Gene

Saro_0958

Organism
Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciNARO279238:GHBU-971-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein-disulfide isomeraseImported
Gene namesi
Ordered Locus Names:Saro_0958Imported
OrganismiNovosphingobium aromaticivorans (strain DSM 12444 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
Proteomesi
  • UP000009134 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2520HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi114 ↔ 184Combined sources

Interactioni

Protein-protein interaction databases

STRINGi279238.Saro_0958.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3GMFX-ray1.76A45-238[»]
ProteinModelPortaliQ2G9S0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2G9S0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 232186Thioredoxin-like_foldInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiCOG1651. LUCA.
HOGENOMiHOG000142304.
OMAiFVSYTCP.
OrthoDBiEOG6TR0CZ.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13462. Thioredoxin_4. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q2G9S0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIGKSIRAIA GTMIAAGAAV LLMGAGKPAK PAPRANWVAS STVTADGHHL
60 70 80 90 100
LGNPAAKLRL VEFVSYTCPH CSHFEIESEG QLKIGMVQPG KGAIEVRNFV
110 120 130 140 150
RDPIDMTVAL ITNCVPPSRF FTLHTAFMRS QAQWIGPLAN STEAQRQRWF
160 170 180 190 200
NGTFATRTRA IASDFRFYDF MAARGMDRST LDRCLSNEAL AKKLAAETDE
210 220 230
AINQYNVSGT PSFMIDGILL AGTHDWASLR PQILARLN
Length:238
Mass (Da):25,937
Last modified:March 21, 2006 - v1
Checksum:i0ABBF609FC293738
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD25403.1.
RefSeqiWP_011444617.1. NC_007794.1.

Genome annotation databases

EnsemblBacteriaiABD25403; ABD25403; Saro_0958.
KEGGinar:Saro_0958.
PATRICi22784542. VBINovAro50627_0977.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD25403.1.
RefSeqiWP_011444617.1. NC_007794.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3GMFX-ray1.76A45-238[»]
ProteinModelPortaliQ2G9S0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi279238.Saro_0958.

Protocols and materials databases

DNASUi3915740.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD25403; ABD25403; Saro_0958.
KEGGinar:Saro_0958.
PATRICi22784542. VBINovAro50627_0977.

Phylogenomic databases

eggNOGiCOG1651. LUCA.
HOGENOMiHOG000142304.
OMAiFVSYTCP.
OrthoDBiEOG6TR0CZ.

Enzyme and pathway databases

BioCyciNARO279238:GHBU-971-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ2G9S0.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13462. Thioredoxin_4. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12444 / F199Imported.
  2. "Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans."
    Patskovsky Y., Ramagopal U.A., Toro R., Morano C., Freeman J., Chang S., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (MAR-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 45-238, DISULFIDE BONDS.

Entry informationi

Entry nameiQ2G9S0_NOVAD
AccessioniPrimary (citable) accession number: Q2G9S0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: July 6, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.