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Protein
Submitted name:

Polysaccharide deacetylase

Gene

Saro_1595

Organism
Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciNARO279238:GHBU-1619-MONOMER.

Protein family/group databases

CAZyiGH18. Glycoside Hydrolase Family 18.
GT2. Glycosyltransferase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Polysaccharide deacetylaseImported
Gene namesi
Ordered Locus Names:Saro_1595Imported
OrganismiNovosphingobium aromaticivorans (strain DSM 12444 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
Proteomesi
  • UP000009134 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4222HelicalSequence analysisAdd
BLAST
Transmembranei689 – 71426HelicalSequence analysisAdd
BLAST
Transmembranei994 – 101219HelicalSequence analysisAdd
BLAST
Transmembranei1024 – 104118HelicalSequence analysisAdd
BLAST
Transmembranei1065 – 108521HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi279238.Saro_1595.

Structurei

3D structure databases

ProteinModelPortaliQ2G7Y8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini455 – 648194NodB homologyInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105CND. Bacteria.
COG0726. LUCA.
COG1215. LUCA.
COG3858. LUCA.
HOGENOMiHOG000094511.
OMAiGTLQCLW.
OrthoDBiEOG6SZ1J2.

Family and domain databases

Gene3Di3.20.20.370. 1 hit.
3.20.20.80. 2 hits.
3.90.550.10. 1 hit.
InterProiIPR011583. Chitinase_II.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR001223. Glyco_hydro18_cat.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR002509. NODB_dom.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00704. Glyco_hydro_18. 1 hit.
PF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SMARTiSM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF53448. SSF53448. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS51677. NODB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2G7Y8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRPIFYDPT GRRSLLAKRS LAVVFLAVIL AALAFATTLV AVPRQRALSL
60 70 80 90 100
PQPHFEAASL HRGHGLSRLR SWLPRLHLQR SQEALAIGFY QPRSDASFQS
110 120 130 140 150
LSRHGNQLDW VVPALLNVAG PEHRLAVSND PRFDSFVAAG HHHYKVLPMV
160 170 180 190 200
QNVGGDGWDG ANVARILENA TERHALERQL ADYVARRGDA GLVLDFEDLP
210 220 230 240 250
ATAMRPYVAF LRETNALLPA GAQLAVTAPA GEDDWPIAAL GRAADKVILM
260 270 280 290 300
AYDEHWQNGA AGPIASQTWF TNEVEKSARA LPADRLVIAL GSYGYDWHQG
310 320 330 340 350
GTDALSLSDA WLAAHDSHAP IIFDKASGNA GFAYEQDGVS HTVWMLDAAT
360 370 380 390 400
DWNEMLAVQR LGIGNLALWR LGTEDPGFWN DLAALRSGKA PDLSRLVSEG
410 420 430 440 450
GNDVEGTGEI LRITATPVAG SRTVAFGDQH LIRDERYGDL PTPFVVRRTG
460 470 480 490 500
AANPKLLALT FDDGPDPKWT PKVLSTLEAA HVPATFFVIG ENALVRPDLL
510 520 530 540 550
RRMVADGDEI GNHTYTHPNL AGSSEAETRL EINATQRLVQ AYTGRSMTLF
560 570 580 590 600
RAPYFGDAEP TTADELQPAL RAQQAGYTIV GLHVDPNDWQ NPGTDEIVRQ
610 620 630 640 650
VVNQIHNATE QSSSNVILLH DGGGDRSQTV AALPRIVAVL RAEGYSFVTA
660 670 680 690 700
SQLVGIPPQA AMPRLSSSDL AAVRVDVAAF LALDGLVTLF SWLFFVAIAL
710 720 730 740 750
GIARAVIMAG LAWWQSRSPR AEPPAFEPTV SVIIPAWNEE RVIAASVERV
760 770 780 790 800
LASDYPALQV IVADDGSKDA TSAVVARHFG HDPRVTLLTL ANGGKAAALN
810 820 830 840 850
RALRHATGEV VIALDADTQF EPLTIRRLAR WFADPRIGAV AGDARVGNRV
860 870 880 890 900
NLVTRWQAVE YITAQNLERR ALAGFDAMTV VPGAVGAWRR AALDSVGGYP
910 920 930 940 950
ENTLAEDQDL TIAIQRKGWR VTYDPRAVAW TEAPQTFRAL ARQRYRWAFG
960 970 980 990 1000
TLQCLWKHRK VITSRKPAGL GLVGLPQAWL FQIAFAAISP LIDGALIASI
1010 1020 1030 1040 1050
ISTVVRVVQH GWAQTQGDLG RMAIYWSLFT AIDVICGWIA YRLDDKRPPY
1060 1070 1080 1090 1100
PAHLLVAQRI VYRQIMYWVV LRALASAIGG WIVGWGKLER TGTVSPAPER

A
Length:1,101
Mass (Da):119,990
Last modified:March 21, 2006 - v1
Checksum:iFFBD8F5AD1755FF2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD26035.1.
RefSeqiWP_011445245.1. NC_007794.1.

Genome annotation databases

EnsemblBacteriaiABD26035; ABD26035; Saro_1595.
KEGGinar:Saro_1595.
PATRICi22785866. VBINovAro50627_1629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD26035.1.
RefSeqiWP_011445245.1. NC_007794.1.

3D structure databases

ProteinModelPortaliQ2G7Y8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi279238.Saro_1595.

Protein family/group databases

CAZyiGH18. Glycoside Hydrolase Family 18.
GT2. Glycosyltransferase Family 2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD26035; ABD26035; Saro_1595.
KEGGinar:Saro_1595.
PATRICi22785866. VBINovAro50627_1629.

Phylogenomic databases

eggNOGiENOG4105CND. Bacteria.
COG0726. LUCA.
COG1215. LUCA.
COG3858. LUCA.
HOGENOMiHOG000094511.
OMAiGTLQCLW.
OrthoDBiEOG6SZ1J2.

Enzyme and pathway databases

BioCyciNARO279238:GHBU-1619-MONOMER.

Family and domain databases

Gene3Di3.20.20.370. 1 hit.
3.20.20.80. 2 hits.
3.90.550.10. 1 hit.
InterProiIPR011583. Chitinase_II.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR001223. Glyco_hydro18_cat.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR002509. NODB_dom.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00704. Glyco_hydro_18. 1 hit.
PF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SMARTiSM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF53448. SSF53448. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS51677. NODB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12444 / F199Imported.

Entry informationi

Entry nameiQ2G7Y8_NOVAD
AccessioniPrimary (citable) accession number: Q2G7Y8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: May 11, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.